BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023176
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    78   7e-13
ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    74   1e-11

>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           VVTF+ILVDAL KEG   EAL VF  M+Q  + P++VTY+SLIHG+C SS W +++ LL+
Sbjct: 314 VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLN 373

Query: 21  DMISRGI 1
           +M+SR I
Sbjct: 374 EMLSRNI 380



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           VVTF+I VD   K+G  SEA  +  LM++RG+ PNVVTY SL+ G C+ S  ++A ++  
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443

Query: 21  DMISRG 4
            M+++G
Sbjct: 444 IMVNKG 449



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/63 (42%), Positives = 42/63 (66%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           VV+++I++D+L K    +EA+ +F  M   GI P VVTY SLI+G+C S  W +A+ L  
Sbjct: 244 VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFK 303

Query: 21  DMI 13
           +M+
Sbjct: 304 EML 306


>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           VVTFN+L+D L KEG+  EA  + E+M+QRGI+PN++TY SLI G C+  + N A EL  
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 21  DMISRG 4
            M S+G
Sbjct: 372 SMPSKG 377



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/67 (41%), Positives = 47/67 (70%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           V++++I++DAL K+ R  EA  +FE M  +G+ P V++YTSLIHG C    W +A  L +
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 21  DMISRGI 1
           +M+++G+
Sbjct: 302 EMVNQGV 308


>ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           VVTFN+L+D L KEG+  EA  + E+M+QRGI+PN++TY SLI G C+  + N A EL  
Sbjct: 304 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 363

Query: 21  DMISRG 4
            M S+G
Sbjct: 364 SMPSKG 369


>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/67 (49%), Positives = 50/67 (74%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           +VTF++L+D L KEG+ +EA ++ E+M+QRGI+PN++TY SLI G C+  + N A EL  
Sbjct: 307 MVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFL 366

Query: 21  DMISRGI 1
            M S+G+
Sbjct: 367 SMPSKGL 373



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 26/67 (38%), Positives = 49/67 (73%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           V+T++I++D L K GR  EA ++FE M  +G++P+V++Y++LIHG C +  W+++  L  
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296

Query: 21  DMISRGI 1
           +M+ +G+
Sbjct: 297 EMVDQGV 303


>ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = -2

Query: 195 TFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLHDM 16
           TFNILVDAL KEGR  EA  VF +M++RG  P++VTY +L+ G C+S+N ++A EL + M
Sbjct: 267 TFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326

Query: 15  ISRGI 1
           + RG+
Sbjct: 327 VKRGL 331



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -2

Query: 201 VVTFNILVDALGKEGRTSEALQVFELMLQRGIMPNVVTYTSLIHGLCISSNWNKATELLH 22
           ++T++ ++D L K+   ++AL++F L+  RGI+ +VV Y SLIHG C    W +AT LL 
Sbjct: 195 LITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLT 254

Query: 21  DMISRGI 1
            M+   I
Sbjct: 255 MMVRGNI 261