BLASTX nr result

ID: Coptis23_contig00023171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023171
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532342.1| nucleic acid binding protein, putative [Rici...    79   1e-12
ref|NP_191350.1| D111/G-patch domain-containing protein [Arabido...    77   4e-12
ref|XP_002876444.1| hypothetical protein ARALYDRAFT_486242 [Arab...    77   7e-12
ref|NP_001242303.1| uncharacterized protein LOC100806249 [Glycin...    75   1e-11
ref|XP_003519055.1| PREDICTED: coiled-coil domain-containing pro...    75   2e-11

>ref|XP_002532342.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527959|gb|EEF30044.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 257

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +2

Query: 350 QDLHDILVRLREEHHYCLFCGFQYESTEALLSNCPGTDEDDH 475
           +DL +IL++LR+EH YCLFCGFQYE+ EALLS+CPGTDEDDH
Sbjct: 216 EDLQEILMKLRDEHRYCLFCGFQYETKEALLSDCPGTDEDDH 257


>ref|NP_191350.1| D111/G-patch domain-containing protein [Arabidopsis thaliana]
           gi|6729534|emb|CAB67619.1| putative protein [Arabidopsis
           thaliana] gi|46931310|gb|AAT06459.1| At3g57910
           [Arabidopsis thaliana] gi|62320600|dbj|BAD95245.1|
           putative protein [Arabidopsis thaliana]
           gi|332646195|gb|AEE79716.1| D111/G-patch
           domain-containing protein [Arabidopsis thaliana]
          Length = 265

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +2

Query: 350 QDLHDILVRLREEHHYCLFCGFQYESTEALLSNCPGTDEDDH 475
           +DL +IL++LR EH YCLFCGFQYE+TEALLSNCPG +EDDH
Sbjct: 224 EDLQEILMKLRAEHWYCLFCGFQYETTEALLSNCPGVNEDDH 265


>ref|XP_002876444.1| hypothetical protein ARALYDRAFT_486242 [Arabidopsis lyrata subsp.
           lyrata] gi|297322282|gb|EFH52703.1| hypothetical protein
           ARALYDRAFT_486242 [Arabidopsis lyrata subsp. lyrata]
          Length = 265

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +2

Query: 350 QDLHDILVRLREEHHYCLFCGFQYESTEALLSNCPGTDEDDH 475
           +DL +IL++LR+EH YC FCGFQYE+TEALLSNCPG +EDDH
Sbjct: 224 EDLQEILMKLRDEHRYCPFCGFQYETTEALLSNCPGVNEDDH 265


>ref|NP_001242303.1| uncharacterized protein LOC100806249 [Glycine max]
           gi|255647124|gb|ACU24030.1| unknown [Glycine max]
          Length = 262

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = +2

Query: 350 QDLHDILVRLREEHHYCLFCGFQYESTEALLSNCPGTDEDDH 475
           +DLHD+L++LR+E +YCLFCG QYES  ALL+NCPGT+EDDH
Sbjct: 221 EDLHDVLMKLRDEFNYCLFCGCQYESNHALLANCPGTNEDDH 262


>ref|XP_003519055.1| PREDICTED: coiled-coil domain-containing protein 75-like [Glycine
           max]
          Length = 269

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 38/42 (90%)
 Frame = +2

Query: 350 QDLHDILVRLREEHHYCLFCGFQYESTEALLSNCPGTDEDDH 475
           +DLHD+L++LR+E +YCLFCG QYES++ LL NCPGT+EDDH
Sbjct: 228 EDLHDVLMKLRDEFNYCLFCGCQYESSDVLLGNCPGTNEDDH 269


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