BLASTX nr result

ID: Coptis23_contig00023166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023166
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula] gi|...   177   6e-43
ref|XP_002298086.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vi...   174   9e-42
emb|CBI34804.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis ...   171   7e-41

>ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula]
           gi|355512544|gb|AES94167.1| Ycf49-like protein [Medicago
           truncatula]
          Length = 172

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/109 (75%), Positives = 89/109 (81%)
 Frame = -1

Query: 452 LQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAFC 273
           L+L EP NALSLPTWA+HVSSVVEWI AM LVW+YGE SGYE+WKGLSWGMVPLLGGAFC
Sbjct: 64  LELQEPSNALSLPTWAVHVSSVVEWIIAMALVWQYGEKSGYEAWKGLSWGMVPLLGGAFC 123

Query: 272 ACTWHFFYNXXXXXXXXXXXXXLTVIGNFTMCIAAFRIYKSSQGGSENL 126
           ACTWHFFYN             LTVIGNFTMCIAA+RIYKSS+  SEN+
Sbjct: 124 ACTWHFFYNSDSLEVLVALQAALTVIGNFTMCIAAYRIYKSSRESSENI 172


>ref|XP_002298086.1| predicted protein [Populus trichocarpa] gi|222845344|gb|EEE82891.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/116 (74%), Positives = 91/116 (78%), Gaps = 2/116 (1%)
 Frame = -1

Query: 467 AAEFPL--QLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVP 294
           A E PL  QLSEP NALSLPTWAIHVSSVVEWIAAM LVW+YGE SG+ESWKGL+WGMVP
Sbjct: 73  ATELPLLGQLSEPANALSLPTWAIHVSSVVEWIAAMALVWQYGEKSGFESWKGLAWGMVP 132

Query: 293 LLGGAFCACTWHFFYNXXXXXXXXXXXXXLTVIGNFTMCIAAFRIYKSSQGGSENL 126
           LLGGAFCACTWHFFYN             LTVIGN TMCIAAFRI+ SS+  S NL
Sbjct: 133 LLGGAFCACTWHFFYNSESLEVLVALQAALTVIGNATMCIAAFRIHMSSEERSRNL 188


>ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vinifera]
          Length = 181

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/110 (75%), Positives = 88/110 (80%)
 Frame = -1

Query: 455 PLQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAF 276
           PLQ SEP NALSLPTWAIHVSSVVEWI AM LVW+YGE  G+ESWKGLSWGMVPLLGGAF
Sbjct: 72  PLQFSEPANALSLPTWAIHVSSVVEWIIAMILVWKYGEQPGFESWKGLSWGMVPLLGGAF 131

Query: 275 CACTWHFFYNXXXXXXXXXXXXXLTVIGNFTMCIAAFRIYKSSQGGSENL 126
           CACTWHFFYN             LTV+GN TMCIAAFRIY+SSQ  S+NL
Sbjct: 132 CACTWHFFYNSESLEVLVALQAALTVLGNATMCIAAFRIYQSSQERSKNL 181


>emb|CBI34804.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/110 (75%), Positives = 88/110 (80%)
 Frame = -1

Query: 455 PLQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAF 276
           PLQ SEP NALSLPTWAIHVSSVVEWI AM LVW+YGE  G+ESWKGLSWGMVPLLGGAF
Sbjct: 28  PLQFSEPANALSLPTWAIHVSSVVEWIIAMILVWKYGEQPGFESWKGLSWGMVPLLGGAF 87

Query: 275 CACTWHFFYNXXXXXXXXXXXXXLTVIGNFTMCIAAFRIYKSSQGGSENL 126
           CACTWHFFYN             LTV+GN TMCIAAFRIY+SSQ  S+NL
Sbjct: 88  CACTWHFFYNSESLEVLVALQAALTVLGNATMCIAAFRIYQSSQERSKNL 137


>ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis sativus]
           gi|449494281|ref|XP_004159501.1| PREDICTED: ycf49-like
           protein-like [Cucumis sativus]
          Length = 186

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/109 (75%), Positives = 86/109 (78%)
 Frame = -1

Query: 452 LQLSEPENALSLPTWAIHVSSVVEWIAAMGLVWRYGETSGYESWKGLSWGMVPLLGGAFC 273
           L  +EP+NALSLPTWAIHVSSVVEWI AM LVW+YGE SG ESWKGLSWGMVPLLGGAFC
Sbjct: 78  LLFNEPQNALSLPTWAIHVSSVVEWITAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFC 137

Query: 272 ACTWHFFYNXXXXXXXXXXXXXLTVIGNFTMCIAAFRIYKSSQGGSENL 126
           ACTWHFFYN             LT IGN TMCIAAFRIYKSSQ  S+NL
Sbjct: 138 ACTWHFFYNSESLEVLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL 186


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