BLASTX nr result

ID: Coptis23_contig00023156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023156
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531144.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Gly...   136   2e-30
ref|XP_003524853.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Gly...   134   1e-29
ref|XP_002524895.1| muconate cycloisomerase, putative [Ricinus c...   133   2e-29
ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cuc...   128   4e-28
emb|CBI15492.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_003531144.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Glycine max]
          Length = 442

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/86 (77%), Positives = 74/86 (86%)
 Frame = +3

Query: 3   SVGWGEAPILPFVTAEDQSTALAKAGEACEFLRKSRPATLSSVLNEIGGILHGHKFASVR 182
           SVGWGEAPILPFVTAEDQ+TA+AKA EAC FLR+    TL S+L EI GIL GH+FASVR
Sbjct: 120 SVGWGEAPILPFVTAEDQTTAMAKASEACAFLRRCPALTLGSMLGEIAGILPGHQFASVR 179

Query: 183 AGVEMALIDAVANSIGTPLWRLFGGA 260
           AG+EMA+IDAVANSI  PLWRLFGGA
Sbjct: 180 AGMEMAIIDAVANSIRVPLWRLFGGA 205


>ref|XP_003524853.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Glycine max]
          Length = 387

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/86 (75%), Positives = 72/86 (83%)
 Frame = +3

Query: 3   SVGWGEAPILPFVTAEDQSTALAKAGEACEFLRKSRPATLSSVLNEIGGILHGHKFASVR 182
           +VGWGEAPILPFVTAEDQ+TA+ KA EAC FLRK    TL S+L EI GIL GH+FAS R
Sbjct: 65  AVGWGEAPILPFVTAEDQTTAMVKASEACAFLRKCPALTLGSMLGEIAGILPGHQFASAR 124

Query: 183 AGVEMALIDAVANSIGTPLWRLFGGA 260
           AG+EMA+IDAVANSI  PLWRLFGGA
Sbjct: 125 AGIEMAIIDAVANSIRVPLWRLFGGA 150


>ref|XP_002524895.1| muconate cycloisomerase, putative [Ricinus communis]
           gi|223535858|gb|EEF37519.1| muconate cycloisomerase,
           putative [Ricinus communis]
          Length = 375

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/83 (78%), Positives = 70/83 (84%)
 Frame = +3

Query: 9   GWGEAPILPFVTAEDQSTALAKAGEACEFLRKSRPATLSSVLNEIGGILHGHKFASVRAG 188
           GWGE PILPFVTAEDQ TA+ KA EACE L+ S P TL S+L +IG IL GH+FASVRAG
Sbjct: 70  GWGETPILPFVTAEDQPTAMVKAREACELLKSSPPMTLGSLLEKIGAILPGHQFASVRAG 129

Query: 189 VEMALIDAVANSIGTPLWRLFGG 257
           VEMALIDAVANSIG PLWRLFGG
Sbjct: 130 VEMALIDAVANSIGIPLWRLFGG 152


>ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
           gi|449497562|ref|XP_004160436.1| PREDICTED: LOW QUALITY
           PROTEIN: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
          Length = 432

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/84 (75%), Positives = 70/84 (83%)
 Frame = +3

Query: 6   VGWGEAPILPFVTAEDQSTALAKAGEACEFLRKSRPATLSSVLNEIGGILHGHKFASVRA 185
           VGWGEAPILPFVTAEDQSTA+AKA E CE LR+  P+TL S + +I   L GH+FASVRA
Sbjct: 110 VGWGEAPILPFVTAEDQSTAMAKAEEVCELLRQRPPSTLGSAMMQISETLPGHEFASVRA 169

Query: 186 GVEMALIDAVANSIGTPLWRLFGG 257
           GVEMALIDAVANSI  PLW+LFGG
Sbjct: 170 GVEMALIDAVANSINIPLWKLFGG 193


>emb|CBI15492.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +3

Query: 6   VGWGEAPILPFVTAEDQSTALAKAGEACEFLRKSRPATLSSVLNEIGGILHGHKFASVRA 185
           VGWGE PILPFVTAE+Q+TA+AKA E CE LR+    TL  +L EIG  L GH+FASVRA
Sbjct: 62  VGWGEGPILPFVTAENQATAMAKAAEVCEVLRRRPAMTLGMLLGEIGEALPGHEFASVRA 121

Query: 186 GVEMALIDAVANSIGTPLWRLFGG 257
           GVEMALIDAVANS+G PLWRLFGG
Sbjct: 122 GVEMALIDAVANSMGIPLWRLFGG 145


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