BLASTX nr result

ID: Coptis23_contig00023148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023148
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320362.1| predicted protein [Populus trichocarpa] gi|2...   306   3e-81
ref|XP_002276039.1| PREDICTED: RING finger and CHY zinc finger d...   305   6e-81
ref|XP_002268410.1| PREDICTED: RING finger and CHY zinc finger d...   304   1e-80
ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
gb|AEX97080.1| zinc-finger protein [Malus x domestica]                302   5e-80

>ref|XP_002320362.1| predicted protein [Populus trichocarpa] gi|222861135|gb|EEE98677.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  306 bits (784), Expect = 3e-81
 Identities = 133/206 (64%), Positives = 154/206 (74%)
 Frame = -2

Query: 638 CEHYKRRCKIRAPCCNKIFPCRHCHNEATSMLDNPKDIHDIVRTDVTQVICSVCDTEQQV 459
           CEHY+RRCKIRAPCCN+IF CRHCHNEATS L NPKD H+IVRTD+ QVICSVC+TEQ+V
Sbjct: 1   CEHYRRRCKIRAPCCNQIFSCRHCHNEATSSLSNPKDRHEIVRTDIKQVICSVCNTEQEV 60

Query: 458 AHICTKCGVYMGEYFCGVCKFYDDETAKGQFHXXXXXXXXXXXXXXXXXXXXFFLDIAVS 279
           A +C KCGV MGEYFC +CKFYDD+T+K Q                              
Sbjct: 61  AQVCNKCGVKMGEYFCDICKFYDDDTSKQQ------------------------------ 90

Query: 278 M*PRFHCSGCGICRVGGRENFFHCKKCGSCYATSLQDNHSCVENSMQNHCPICYEYLFDS 99
               FHC  CGICR+GGRENFFHC+KCGSCYA  ++DNHSCVENSM+N+CP+CYEYLFDS
Sbjct: 91  ----FHCDSCGICRLGGRENFFHCEKCGSCYAIDMRDNHSCVENSMKNYCPVCYEYLFDS 146

Query: 98  LKAASVMKCGHTIHMDCFKEMGKHNQ 21
           +K A+VMKCGHT+HMDCF+EM K  Q
Sbjct: 147 VKQATVMKCGHTMHMDCFREMAKQQQ 172


>ref|XP_002276039.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Vitis vinifera] gi|297736904|emb|CBI26105.3|
           unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  305 bits (781), Expect = 6e-81
 Identities = 134/214 (62%), Positives = 155/214 (72%)
 Frame = -2

Query: 662 DFGKMKYGCEHYKRRCKIRAPCCNKIFPCRHCHNEATSMLDNPKDIHDIVRTDVTQVICS 483
           DFGKM +GC+HY+RRC+IRAPCCN+IFPCRHCHNEATSML NP D H++VR DV QVIC+
Sbjct: 10  DFGKMGFGCKHYRRRCRIRAPCCNEIFPCRHCHNEATSMLRNPFDRHELVRHDVKQVICA 69

Query: 482 VCDTEQQVAHICTKCGVYMGEYFCGVCKFYDDETAKGQFHXXXXXXXXXXXXXXXXXXXX 303
           VCDTEQ VA +CT CGV MGEYFC VCKFYDD+T KGQ                      
Sbjct: 70  VCDTEQPVAQVCTNCGVNMGEYFCEVCKFYDDDTTKGQ---------------------- 107

Query: 302 FFLDIAVSM*PRFHCSGCGICRVGGRENFFHCKKCGSCYATSLQDNHSCVENSMQNHCPI 123
                       FHC  CGICRVGGR+ FFHCKKCG CY+  L+DNHSCVENSM++HCPI
Sbjct: 108 ------------FHCDDCGICRVGGRDKFFHCKKCGCCYSVGLRDNHSCVENSMRHHCPI 155

Query: 122 CYEYLFDSLKAASVMKCGHTIHMDCFKEMGKHNQ 21
           CYEYLFDSLK  +VM CGHT+H +C+ EM  H++
Sbjct: 156 CYEYLFDSLKDTTVMVCGHTMHCECYNEMVSHDK 189


>ref|XP_002268410.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 [Vitis vinifera] gi|296086625|emb|CBI32260.3|
           unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  304 bits (778), Expect = 1e-80
 Identities = 131/215 (60%), Positives = 157/215 (73%)
 Frame = -2

Query: 665 QDFGKMKYGCEHYKRRCKIRAPCCNKIFPCRHCHNEATSMLDNPKDIHDIVRTDVTQVIC 486
           +DFGKM+YGCEHYKRRCKIRAPCCNKIFPCRHCHNEA + L +PKD H+IVR D+ QVIC
Sbjct: 11  EDFGKMQYGCEHYKRRCKIRAPCCNKIFPCRHCHNEAMTSLSDPKDRHEIVRHDIKQVIC 70

Query: 485 SVCDTEQQVAHICTKCGVYMGEYFCGVCKFYDDETAKGQFHXXXXXXXXXXXXXXXXXXX 306
           SVC+ EQQVA +C+ CGV MGEYFC +CKFYDD+T K Q                     
Sbjct: 71  SVCNEEQQVARVCSNCGVNMGEYFCDICKFYDDDTEKQQ--------------------- 109

Query: 305 XFFLDIAVSM*PRFHCSGCGICRVGGRENFFHCKKCGSCYATSLQDNHSCVENSMQNHCP 126
                        FHC  CGICRVGGRE FFHC+KCGSCY+  L+DNH CVENSM++HCP
Sbjct: 110 -------------FHCDECGICRVGGREKFFHCQKCGSCYSVDLRDNHLCVENSMRSHCP 156

Query: 125 ICYEYLFDSLKAASVMKCGHTIHMDCFKEMGKHNQ 21
           IC+EYLF+S+K+ ++MKCGHT+H++C+ EM   NQ
Sbjct: 157 ICFEYLFESVKSTTIMKCGHTMHVECYIEMANQNQ 191


>ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|222852578|gb|EEE90125.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  303 bits (777), Expect = 2e-80
 Identities = 136/214 (63%), Positives = 157/214 (73%)
 Frame = -2

Query: 662 DFGKMKYGCEHYKRRCKIRAPCCNKIFPCRHCHNEATSMLDNPKDIHDIVRTDVTQVICS 483
           DFGKM YGC+HY+RRC+IRAPCCN+IF CRHCHNEAT+ML N  D H++ R DV QVIC+
Sbjct: 12  DFGKMGYGCQHYRRRCQIRAPCCNEIFTCRHCHNEATNMLKNFCDRHELNRYDVKQVICA 71

Query: 482 VCDTEQQVAHICTKCGVYMGEYFCGVCKFYDDETAKGQFHXXXXXXXXXXXXXXXXXXXX 303
           VCDTEQ VA +CT CGV MGEYFC +CKF+DD+TAKGQ                      
Sbjct: 72  VCDTEQPVAQVCTNCGVNMGEYFCEICKFFDDDTAKGQ---------------------- 109

Query: 302 FFLDIAVSM*PRFHCSGCGICRVGGRENFFHCKKCGSCYATSLQDNHSCVENSMQNHCPI 123
                       FHC  CGICRVGGREN+FHCKKCGSCYATSL DNHSCVENSM++HCPI
Sbjct: 110 ------------FHCDDCGICRVGGRENYFHCKKCGSCYATSLLDNHSCVENSMRHHCPI 157

Query: 122 CYEYLFDSLKAASVMKCGHTIHMDCFKEMGKHNQ 21
           CYEYLFDSLK  +VMKCGHT+H +C+ EM K ++
Sbjct: 158 CYEYLFDSLKETTVMKCGHTMHGECYDEMIKRDK 191


>gb|AEX97080.1| zinc-finger protein [Malus x domestica]
          Length = 267

 Score =  302 bits (773), Expect = 5e-80
 Identities = 130/214 (60%), Positives = 156/214 (72%)
 Frame = -2

Query: 662 DFGKMKYGCEHYKRRCKIRAPCCNKIFPCRHCHNEATSMLDNPKDIHDIVRTDVTQVICS 483
           +FGKM YGC+HY+RRC+IRAPCCN+I+PCRHCHNEATSML NP D H++VR DV QV+CS
Sbjct: 10  EFGKMGYGCKHYRRRCQIRAPCCNEIYPCRHCHNEATSMLSNPFDRHELVRYDVKQVVCS 69

Query: 482 VCDTEQQVAHICTKCGVYMGEYFCGVCKFYDDETAKGQFHXXXXXXXXXXXXXXXXXXXX 303
           VCDTEQ VA +CT CGV MGEYFC +CKFYDD+T K Q                      
Sbjct: 70  VCDTEQPVARVCTNCGVSMGEYFCDICKFYDDDTTKEQ---------------------- 107

Query: 302 FFLDIAVSM*PRFHCSGCGICRVGGRENFFHCKKCGSCYATSLQDNHSCVENSMQNHCPI 123
                       FHC+ CGICR+GGR+ FFHCKKCGSCY+  L+DNH CVENSM++HCPI
Sbjct: 108 ------------FHCNDCGICRIGGRDKFFHCKKCGSCYSNGLRDNHLCVENSMRHHCPI 155

Query: 122 CYEYLFDSLKAASVMKCGHTIHMDCFKEMGKHNQ 21
           CYE+LFDSLK  +VMKCGHT+H +C+ EM K ++
Sbjct: 156 CYEFLFDSLKETTVMKCGHTMHCECYNEMMKRDK 189


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