BLASTX nr result

ID: Coptis23_contig00023147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023147
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31123.3| unnamed protein product [Vitis vinifera]              218   8e-55
ref|XP_002264263.1| PREDICTED: seryl-tRNA synthetase-like [Vitis...   218   8e-55
emb|CAN70424.1| hypothetical protein VITISV_000798 [Vitis vinifera]   218   8e-55
ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis...   214   8e-54
ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis...   214   8e-54

>emb|CBI31123.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  218 bits (555), Expect = 8e-55
 Identities = 106/122 (86%), Positives = 114/122 (93%)
 Frame = +1

Query: 103 RTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRFRPSSSEQSS 282
           +TLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIR+RPS S  S 
Sbjct: 33  KTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSES-LSM 91

Query: 283 NPKKGKANFGPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVVIPEPLRPFMGGLDRIS 462
           NPK+G  N  PTQFVHTLNATACAVPRMIVCLLEN+QQEDG+V+IPEPLRPFMGGL+RI+
Sbjct: 92  NPKRG-MNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGNVIIPEPLRPFMGGLERIT 150

Query: 463 PK 468
           PK
Sbjct: 151 PK 152


>ref|XP_002264263.1| PREDICTED: seryl-tRNA synthetase-like [Vitis vinifera]
          Length = 207

 Score =  218 bits (555), Expect = 8e-55
 Identities = 106/122 (86%), Positives = 114/122 (93%)
 Frame = +1

Query: 103 RTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRFRPSSSEQSS 282
           +TLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIR+RPS S  S 
Sbjct: 73  KTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSES-LSM 131

Query: 283 NPKKGKANFGPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVVIPEPLRPFMGGLDRIS 462
           NPK+G  N  PTQFVHTLNATACAVPRMIVCLLEN+QQEDG+V+IPEPLRPFMGGL+RI+
Sbjct: 132 NPKRG-MNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGNVIIPEPLRPFMGGLERIT 190

Query: 463 PK 468
           PK
Sbjct: 191 PK 192


>emb|CAN70424.1| hypothetical protein VITISV_000798 [Vitis vinifera]
          Length = 235

 Score =  218 bits (555), Expect = 8e-55
 Identities = 106/122 (86%), Positives = 114/122 (93%)
 Frame = +1

Query: 103 RTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRFRPSSSEQSS 282
           +TLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIR+RPS S  S 
Sbjct: 114 KTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSES-LSM 172

Query: 283 NPKKGKANFGPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVVIPEPLRPFMGGLDRIS 462
           NPK+G  N  PTQFVHTLNATACAVPRMIVCLLEN+QQEDG+V+IPEPLRPFMGGL+RI+
Sbjct: 173 NPKRG-MNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGNVIIPEPLRPFMGGLERIT 231

Query: 463 PK 468
           PK
Sbjct: 232 PK 233


>ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
          Length = 563

 Score =  214 bits (546), Expect = 8e-54
 Identities = 103/121 (85%), Positives = 110/121 (90%)
 Frame = +1

Query: 103 RTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRFRPSSSEQSS 282
           +TLDMAS DLGAPAYRK+DVEAWMPGLGRYGEISSASNCTDYQSRRLGIR+RP   +  S
Sbjct: 441 KTLDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQE-QVPS 499

Query: 283 NPKKGKANFGPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVVIPEPLRPFMGGLDRIS 462
             KKGK N  PTQFVHTLNATACAVPRM+VCLLEN+QQEDGSV+IPEPLRPFMGGLDRIS
Sbjct: 500 TLKKGKGNLAPTQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFMGGLDRIS 559

Query: 463 P 465
           P
Sbjct: 560 P 560


>ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
          Length = 539

 Score =  214 bits (546), Expect = 8e-54
 Identities = 103/121 (85%), Positives = 110/121 (90%)
 Frame = +1

Query: 103 RTLDMASGDLGAPAYRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRFRPSSSEQSS 282
           +TLDMAS DLGAPAYRK+DVEAWMPGLGRYGEISSASNCTDYQSRRLGIR+RP   +  S
Sbjct: 417 KTLDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQE-QVPS 475

Query: 283 NPKKGKANFGPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVVIPEPLRPFMGGLDRIS 462
             KKGK N  PTQFVHTLNATACAVPRM+VCLLEN+QQEDGSV+IPEPLRPFMGGLDRIS
Sbjct: 476 TLKKGKGNLAPTQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFMGGLDRIS 535

Query: 463 P 465
           P
Sbjct: 536 P 536


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