BLASTX nr result

ID: Coptis23_contig00023140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023140
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|2...   262   5e-68
ref|XP_002526513.1| protein binding protein, putative [Ricinus c...   260   2e-67
emb|CBI16756.3| unnamed protein product [Vitis vinifera]              260   2e-67
ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein...   260   2e-67
ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein...   252   5e-65

>ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|222845790|gb|EEE83337.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  262 bits (670), Expect = 5e-68
 Identities = 125/191 (65%), Positives = 150/191 (78%)
 Frame = +2

Query: 2   MGMVLNMLLHNSVLSEWSLDXXXXXXXXXXXXSDGFLREIARLCLEMYGDKVEDEVGGGY 181
           M M+L MLLHNS+L++WSLD            SDGF  ++A  CL +YG KV+ +VG   
Sbjct: 203 MDMILRMLLHNSILNDWSLDALNEDDVVSVLVSDGFPDKLACHCLHVYGSKVDGDVGRSC 262

Query: 182 VWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSESFEMLEGEVLLEKLGIET 361
           VW+L+E RVCVHFAR +L+ GK KME+FM +W+Q+IP  M  SF MLEGEVL EKLG+ET
Sbjct: 263 VWRLDESRVCVHFARQILSTGKKKMETFMAEWLQRIPGRMQASFNMLEGEVLTEKLGVET 322

Query: 362 WIHSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGLSSEGLLLKYTRRTQP 541
           W++SFSVSSLPLTPAERF  LFRER KWE  DL+PYIRDL+VPGLSSEGLLLKYTRRTQP
Sbjct: 323 WVYSFSVSSLPLTPAERFNMLFRERSKWEWKDLQPYIRDLKVPGLSSEGLLLKYTRRTQP 382

Query: 542 TADAEPIFSAR 574
           T DA+P+FS+R
Sbjct: 383 TLDADPVFSSR 393


>ref|XP_002526513.1| protein binding protein, putative [Ricinus communis]
           gi|223534188|gb|EEF35904.1| protein binding protein,
           putative [Ricinus communis]
          Length = 396

 Score =  260 bits (665), Expect = 2e-67
 Identities = 125/191 (65%), Positives = 144/191 (75%)
 Frame = +2

Query: 2   MGMVLNMLLHNSVLSEWSLDXXXXXXXXXXXXSDGFLREIARLCLEMYGDKVEDEVGGGY 181
           M  +L MLLHNS+L++WSLD            SDGF  ++A  CL +YG KV   VG GY
Sbjct: 206 MDTILRMLLHNSILNDWSLDFLNEDEVTNLLASDGFPHKLAHHCLNVYGTKVNGGVGTGY 265

Query: 182 VWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSESFEMLEGEVLLEKLGIET 361
           VWKL+E+RVCVHFAR  L  GK KME FM +W++KIP GM   F+MLEGEVL EKLG+ET
Sbjct: 266 VWKLDERRVCVHFARETLRAGKKKMEDFMGEWLKKIPDGMEAKFDMLEGEVLTEKLGVET 325

Query: 362 WIHSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGLSSEGLLLKYTRRTQP 541
           W+  FS+SSLP TPAERF+ LFRER KWE  DL PYIRDL+VPGLSSE LLLKYTRRTQP
Sbjct: 326 WVRPFSISSLPSTPAERFSMLFRERSKWEWKDLHPYIRDLKVPGLSSEALLLKYTRRTQP 385

Query: 542 TADAEPIFSAR 574
           + DAEPIFSAR
Sbjct: 386 SLDAEPIFSAR 396


>emb|CBI16756.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  260 bits (664), Expect = 2e-67
 Identities = 124/191 (64%), Positives = 150/191 (78%)
 Frame = +2

Query: 2   MGMVLNMLLHNSVLSEWSLDXXXXXXXXXXXXSDGFLREIARLCLEMYGDKVEDEVGGGY 181
           MG +LNMLLHNSVL++WSLD            SDGF R +   CL++YG KV++ VG   
Sbjct: 1   MGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLHCLQVYGSKVDEGVGS-C 59

Query: 182 VWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSESFEMLEGEVLLEKLGIET 361
           VWKL+E+R+C+HFAR +L +GK KMESFME+W+QKIP GM  SF+MLEGEVL EK G+ET
Sbjct: 60  VWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQASFDMLEGEVLTEKFGVET 119

Query: 362 WIHSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGLSSEGLLLKYTRRTQP 541
           W+ +FSVSSLP  PA RF+ LF+ER KWE  DL+PYIRDL VPGLSSEGLLLKYTR+TQP
Sbjct: 120 WVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRKTQP 179

Query: 542 TADAEPIFSAR 574
            +DAEP+FSAR
Sbjct: 180 NSDAEPVFSAR 190


>ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis
           vinifera]
          Length = 397

 Score =  260 bits (664), Expect = 2e-67
 Identities = 124/191 (64%), Positives = 150/191 (78%)
 Frame = +2

Query: 2   MGMVLNMLLHNSVLSEWSLDXXXXXXXXXXXXSDGFLREIARLCLEMYGDKVEDEVGGGY 181
           MG +LNMLLHNSVL++WSLD            SDGF R +   CL++YG KV++ VG   
Sbjct: 208 MGTILNMLLHNSVLNDWSLDALGEDEVVGVLESDGFPRTLGLHCLQVYGSKVDEGVGS-C 266

Query: 182 VWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSESFEMLEGEVLLEKLGIET 361
           VWKL+E+R+C+HFAR +L +GK KMESFME+W+QKIP GM  SF+MLEGEVL EK G+ET
Sbjct: 267 VWKLDERRLCIHFAREILKDGKRKMESFMEEWIQKIPDGMQASFDMLEGEVLTEKFGVET 326

Query: 362 WIHSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGLSSEGLLLKYTRRTQP 541
           W+ +FSVSSLP  PA RF+ LF+ER KWE  DL+PYIRDL VPGLSSEGLLLKYTR+TQP
Sbjct: 327 WVRAFSVSSLPSNPAARFSMLFQERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRKTQP 386

Query: 542 TADAEPIFSAR 574
            +DAEP+FSAR
Sbjct: 387 NSDAEPVFSAR 397


>ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine
           max]
          Length = 396

 Score =  252 bits (644), Expect = 5e-65
 Identities = 119/191 (62%), Positives = 152/191 (79%)
 Frame = +2

Query: 2   MGMVLNMLLHNSVLSEWSLDXXXXXXXXXXXXSDGFLREIARLCLEMYGDKVEDEVGGGY 181
           M M+L M+L N+VL++WSL+            SDGF   +AR CL +YG++V +E    +
Sbjct: 207 MDMILGMILKNAVLNDWSLNALNEDEVVSTLESDGFPGVLARHCLNVYGNRV-NECMPSF 265

Query: 182 VWKLNEKRVCVHFARSVLNEGKMKMESFMEKWMQKIPSGMSESFEMLEGEVLLEKLGIET 361
           VWKL+EKRVC+HFAR +L  GK K+ESFM++W QKIP GM  +F+++EGEVL EK+G+ET
Sbjct: 266 VWKLDEKRVCIHFARDILKGGKRKLESFMDEWRQKIPDGMQPTFDLVEGEVLTEKIGVET 325

Query: 362 WIHSFSVSSLPLTPAERFAALFRERQKWESMDLEPYIRDLRVPGLSSEGLLLKYTRRTQP 541
           W+H+FSV+SLP TPAERF+ LFRER KWE  DL+PYIRDL++PGLSSEGLLLKYTRRTQP
Sbjct: 326 WVHAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLKLPGLSSEGLLLKYTRRTQP 385

Query: 542 TADAEPIFSAR 574
           +ADAEP+FSAR
Sbjct: 386 SADAEPVFSAR 396


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