BLASTX nr result

ID: Coptis23_contig00023134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023134
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30297.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]   101   5e-20
ref|XP_002528749.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18

>emb|CBI30297.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = -2

Query: 218 LFSAAEVVQDSADRMESIFRNLLHEQSLVEAESTTDEKLLTLDYHRRDLATALGTTKWQL 39
           LFSAAEVVQDSADRMESIFR LLHEQ LV+   +  + L +++YHRRDLAT L T KWQL
Sbjct: 13  LFSAAEVVQDSADRMESIFRLLLHEQGLVQGHHSDPKLLTSIEYHRRDLATTLETAKWQL 72

Query: 38  EDFEREVTLSAS 3
           EDFER V+LSA+
Sbjct: 73  EDFERAVSLSAA 84


>emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]
          Length = 346

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = -2

Query: 218 LFSAAEVVQDSADRMESIFRNLLHEQSLVEAESTTDEKLLTLDYHRRDLATALGTTKWQL 39
           LFSAAEVVQDSADRMESIFR LLHEQ LV+   +  + L +++YHRRDLAT L T KWQL
Sbjct: 13  LFSAAEVVQDSADRMESIFRLLLHEQGLVQGHHSDPKLLTSIEYHRRDLATTLETAKWQL 72

Query: 38  EDFEREVTLSAS 3
           EDFER V+LSA+
Sbjct: 73  EDFERAVSLSAA 84


>ref|XP_002528749.1| conserved hypothetical protein [Ricinus communis]
           gi|223531843|gb|EEF33661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = -2

Query: 218 LFSAAEVVQDSADRMESIFRNLLHEQSLVEAESTTDEKLLTLDYHRRDLATALGTTKWQL 39
           LFSAAEVVQDSADRMES+FR LLH+QSLV+ +      L++++YHRRDLAT L T KWQL
Sbjct: 13  LFSAAEVVQDSADRMESLFRLLLHDQSLVQGDHPDPRLLMSIEYHRRDLATILETAKWQL 72

Query: 38  EDFEREVTLSA 6
           EDFER V  SA
Sbjct: 73  EDFERAVHFSA 83


>ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|222843429|gb|EEE80976.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = -2

Query: 218 LFSAAEVVQDSADRMESIFRNLLHEQSLVEAESTTDEKLLTLDYHRRDLATALGTTKWQL 39
           LFSAAEVVQDSADRMES+FR LLHEQ+LV +E      L +++YH+RDLAT LGT KWQL
Sbjct: 13  LFSAAEVVQDSADRMESLFRLLLHEQNLVRSEHPDPRLLSSIEYHKRDLATILGTAKWQL 72

Query: 38  EDFEREVTLSA 6
           EDFER V  S+
Sbjct: 73  EDFERAVNSSS 83


>ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|222848827|gb|EEE86374.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/70 (65%), Positives = 56/70 (80%)
 Frame = -2

Query: 218 LFSAAEVVQDSADRMESIFRNLLHEQSLVEAESTTDEKLLTLDYHRRDLATALGTTKWQL 39
           LFSAAEVVQDS+DRMES+FR +LH+QSLV++E      L +++YH+RDLAT LGT KWQL
Sbjct: 13  LFSAAEVVQDSSDRMESLFRLVLHQQSLVQSEHPDPRFLSSIEYHKRDLATILGTAKWQL 72

Query: 38  EDFEREVTLS 9
           EDFER    S
Sbjct: 73  EDFERAANSS 82


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