BLASTX nr result

ID: Coptis23_contig00023111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023111
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   147   1e-33
gb|ADL36832.1| TCP domain class transcription factor [Malus x do...   140   8e-32
ref|XP_004148022.1| PREDICTED: transcription factor TCP20-like [...   137   9e-31
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   135   3e-30
ref|XP_003553949.1| PREDICTED: transcription factor TCP20-like [...   135   4e-30

>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/101 (75%), Positives = 82/101 (81%)
 Frame = -1

Query: 303 PNSTKQP*EVTKLLKHHPQQEMEENKQTETQDLQISVTEKDEGMKKQLAPKRSSNKDRHT 124
           P  +KQP EV   L   PQ  M ENK  E +D QI + +K+EG KKQLAPKRSSNKDRHT
Sbjct: 3   PKGSKQPQEVPNFLSL-PQPNMGENKPAEVKDFQIVIADKEEG-KKQLAPKRSSNKDRHT 60

Query: 123 KVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 1
           KV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ
Sbjct: 61  KVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 101


>gb|ADL36832.1| TCP domain class transcription factor [Malus x domestica]
          Length = 315

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/102 (69%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = -1

Query: 303 PNSTKQP*EVTKLLKH-HPQQEMEENKQTETQDLQISVTEKDEGMKKQLAPKRSSNKDRH 127
           P S  QP +  +  +   P   M +NK  E +D QI + +KDE  KKQLAPKRSSNKDRH
Sbjct: 20  PQSQPQPEQQQQPQQQPQPNNNMSDNKPAEIKDFQIVIADKDESGKKQLAPKRSSNKDRH 79

Query: 126 TKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 1
           TKV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ
Sbjct: 80  TKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 121


>ref|XP_004148022.1| PREDICTED: transcription factor TCP20-like [Cucumis sativus]
          Length = 296

 Score =  137 bits (345), Expect = 9e-31
 Identities = 75/108 (69%), Positives = 84/108 (77%), Gaps = 8/108 (7%)
 Frame = -1

Query: 300 NSTKQP*EVT-----KLLKHHPQQE---MEENKQTETQDLQISVTEKDEGMKKQLAPKRS 145
           ++TKQP E       KL +    +E   M ENK  E +D QI++ EK+EG KKQLAPKRS
Sbjct: 7   STTKQPQEEVVPNFFKLSQEEAAEEVAIMGENKPAEIKDFQIAIAEKEEG-KKQLAPKRS 65

Query: 144 SNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 1
           SNKDRHTKV+GRGRRIRMPALCAARIFQLTREL HKSDGETIQWLLQQ
Sbjct: 66  SNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLLQQ 113


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score =  135 bits (341), Expect = 3e-30
 Identities = 73/112 (65%), Positives = 80/112 (71%), Gaps = 11/112 (9%)
 Frame = -1

Query: 303 PNSTKQP*EVTKLLKHHPQQE-----------MEENKQTETQDLQISVTEKDEGMKKQLA 157
           PN    P +     +  PQQE           M ENK  E +D QI + +K+E  KKQLA
Sbjct: 15  PNFLTHPPQPALQQQQQPQQEQQHQNQKQQTNMGENKPAEIKDFQIVIADKEE-QKKQLA 73

Query: 156 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 1
           PKRSSNKDRHTKV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ
Sbjct: 74  PKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 125


>ref|XP_003553949.1| PREDICTED: transcription factor TCP20-like [Glycine max]
          Length = 330

 Score =  135 bits (339), Expect = 4e-30
 Identities = 77/110 (70%), Positives = 84/110 (76%), Gaps = 13/110 (11%)
 Frame = -1

Query: 291 KQP*EVT----KLLKHHPQQE-------MEENKQTETQDLQISVT-EKDEGMKKQ-LAPK 151
           +QP EV      L +HH QQ+       M ENK +E +D QI V  EKDE  K+Q LAPK
Sbjct: 9   QQPQEVVPKFLSLPQHHYQQQGNSNNNNMGENKPSEVKDFQIVVAAEKDESKKQQQLAPK 68

Query: 150 RSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 1
           RSSNKDRHTKV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ
Sbjct: 69  RSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ 118


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