BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023094
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24015.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002519323.1| pentatricopeptide repeat-containing protein,...   157   1e-36
ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/92 (79%), Positives = 83/92 (90%)
 Frame = -3

Query: 276 AGMLSACTGLGALEQGEWIHKYIETSGIQVDSKLSTTIIDMYCKCGCVDKAFDVFRGLSH 97
           A MLSACTGLGALEQG+WIH YIE SGI++DSKL+TT+IDMYCKCGC++KA +VF  L  
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 260

Query: 96  KGISSWNCMIGGLAVHGKGESAIELFHEMERE 1
           KGISSWNCMIGGLA+HGKGE+AIELF EMERE
Sbjct: 261 KGISSWNCMIGGLAMHGKGEAAIELFKEMERE 292


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/92 (79%), Positives = 83/92 (90%)
 Frame = -3

Query: 276 AGMLSACTGLGALEQGEWIHKYIETSGIQVDSKLSTTIIDMYCKCGCVDKAFDVFRGLSH 97
           A MLSACTGLGALEQG+WIH YIE SGI++DSKL+TT+IDMYCKCGC++KA +VF  L  
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315

Query: 96  KGISSWNCMIGGLAVHGKGESAIELFHEMERE 1
           KGISSWNCMIGGLA+HGKGE+AIELF EMERE
Sbjct: 316 KGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347


>ref|XP_002519323.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541638|gb|EEF43187.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 396

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/92 (78%), Positives = 82/92 (89%)
 Frame = -3

Query: 276 AGMLSACTGLGALEQGEWIHKYIETSGIQVDSKLSTTIIDMYCKCGCVDKAFDVFRGLSH 97
           A MLSACTGLGALEQG+WIH YIE  GI+ DSKL+T IIDMYCKCG ++KA +VF+GL H
Sbjct: 280 ATMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKALEVFKGLPH 339

Query: 96  KGISSWNCMIGGLAVHGKGESAIELFHEMERE 1
           KGISSWNCMIGGLA+HGKGE+AIELF EME+E
Sbjct: 340 KGISSWNCMIGGLAMHGKGEAAIELFKEMEKE 371


>ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 607

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/92 (76%), Positives = 78/92 (84%)
 Frame = -3

Query: 276 AGMLSACTGLGALEQGEWIHKYIETSGIQVDSKLSTTIIDMYCKCGCVDKAFDVFRGLSH 97
           A MLSACTG+GALEQG WIHKY+E +GI +DSKL+TTIIDMYCKCGC+DKAF VF GL  
Sbjct: 238 ATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKV 297

Query: 96  KGISSWNCMIGGLAVHGKGESAIELFHEMERE 1
           K +SSWNCMIGG A+HGKGE AI LF EME E
Sbjct: 298 KRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEE 329


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/92 (68%), Positives = 79/92 (85%), Gaps = 2/92 (2%)
 Frame = -3

Query: 270 MLSACTGLGALEQGEWIHKYIETSGIQVDSKLSTTIIDMYCKCGCVDKAFDVFRG--LSH 97
           MLSACTGLGAL+QG+WIH+YI+ +GI++DSKL+T I+DMYCKCGC++KA  VF    L  
Sbjct: 261 MLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPC 320

Query: 96  KGISSWNCMIGGLAVHGKGESAIELFHEMERE 1
           + ISSWNCMIGGLA+HG GE+AI+LF EMER+
Sbjct: 321 RWISSWNCMIGGLAMHGNGEAAIQLFKEMERQ 352