BLASTX nr result

ID: Coptis23_contig00023092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023092
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|2...   319   3e-85
ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase s...   318   9e-85
ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus co...   317   1e-84
ref|XP_003590600.1| Methylcrotonoyl-CoA carboxylase subunit alph...   315   7e-84
ref|XP_003518909.1| PREDICTED: methylcrotonoyl-CoA carboxylase s...   313   2e-83

>ref|XP_002307604.1| predicted protein [Populus trichocarpa] gi|222857053|gb|EEE94600.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  319 bits (818), Expect = 3e-85
 Identities = 163/213 (76%), Positives = 178/213 (83%)
 Frame = -1

Query: 640 IEKILIANRGEIACRITTTSKRLGIKTVAVYSDADENSLHVKSADEAVRIGPPPARLSYL 461
           IEKILIANRGEIACRI  T+KRLGI+TVAVYSDAD +SLHVKSADEAV IGPPPARLSYL
Sbjct: 40  IEKILIANRGEIACRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAVHIGPPPARLSYL 99

Query: 460 NAKQIIKAAHTTGAQAVHPGYGFLSESAEFAQLCEDEGLIFIGPPASAIRDMGDKSASKR 281
           N   I++AA  TGAQA+HPGYGFLSES++FA LCED+GL F+GPPASAIRDMGDKSASKR
Sbjct: 100 NGSAIVEAAIRTGAQAIHPGYGFLSESSDFATLCEDKGLTFVGPPASAIRDMGDKSASKR 159

Query: 280 IMGAAGVPLVPGYHGYEQDIDLMKMEADKIGYPILIKPTHGGGGKICLYKGLASLPYLQI 101
           IMGAAGVPLVPGYHG EQDI+LMK EADKIGYPILIKPTHGGGGK               
Sbjct: 160 IMGAAGVPLVPGYHGSEQDIELMKSEADKIGYPILIKPTHGGGGK--------------- 204

Query: 100 HICLIFQGMRIVQSPDQFIESFLGAQREAAASF 2
                  GMRIVQSP++F++SFLGAQREAAASF
Sbjct: 205 -------GMRIVQSPNEFVDSFLGAQREAAASF 230


>ref|XP_003632341.1| PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha,
           mitochondrial-like [Vitis vinifera]
           gi|296085234|emb|CBI28729.3| unnamed protein product
           [Vitis vinifera]
          Length = 735

 Score =  318 bits (814), Expect = 9e-85
 Identities = 164/213 (76%), Positives = 176/213 (82%)
 Frame = -1

Query: 640 IEKILIANRGEIACRITTTSKRLGIKTVAVYSDADENSLHVKSADEAVRIGPPPARLSYL 461
           IEKILIANRGEIACRI  T+KRLGI+TVAV+SDAD +SLHVKSADEAV IGPPPARLSYL
Sbjct: 34  IEKILIANRGEIACRIIRTAKRLGIRTVAVFSDADRDSLHVKSADEAVHIGPPPARLSYL 93

Query: 460 NAKQIIKAAHTTGAQAVHPGYGFLSESAEFAQLCEDEGLIFIGPPASAIRDMGDKSASKR 281
           +A+ II AA  TGAQA+HPGYGFLSESA FAQLCEDEGL FIGPPASAIRDMGDKSASKR
Sbjct: 94  SAQSIIDAAVHTGAQAIHPGYGFLSESAAFAQLCEDEGLTFIGPPASAIRDMGDKSASKR 153

Query: 280 IMGAAGVPLVPGYHGYEQDIDLMKMEADKIGYPILIKPTHGGGGKICLYKGLASLPYLQI 101
           IMGAAGVPLVPGYHG EQDID MK E +KIGYP+LIKPTHGGGGK               
Sbjct: 154 IMGAAGVPLVPGYHGNEQDIDFMKSEGEKIGYPVLIKPTHGGGGK--------------- 198

Query: 100 HICLIFQGMRIVQSPDQFIESFLGAQREAAASF 2
                  GMRIVQSP +F+E+FLGAQREAAASF
Sbjct: 199 -------GMRIVQSPSEFVEAFLGAQREAAASF 224


>ref|XP_002524738.1| acetyl-CoA carboxylase, putative [Ricinus communis]
           gi|223535922|gb|EEF37581.1| acetyl-CoA carboxylase,
           putative [Ricinus communis]
          Length = 742

 Score =  317 bits (813), Expect = 1e-84
 Identities = 160/213 (75%), Positives = 177/213 (83%)
 Frame = -1

Query: 640 IEKILIANRGEIACRITTTSKRLGIKTVAVYSDADENSLHVKSADEAVRIGPPPARLSYL 461
           +EKIL+ANRGEIACRI  T+KRLGIKTVAVYSDAD +SLHVKSADEAV IGPPPARLSYL
Sbjct: 41  VEKILVANRGEIACRIMRTAKRLGIKTVAVYSDADRDSLHVKSADEAVHIGPPPARLSYL 100

Query: 460 NAKQIIKAAHTTGAQAVHPGYGFLSESAEFAQLCEDEGLIFIGPPASAIRDMGDKSASKR 281
           N   I++AA  TGAQA+HPGYGFLSESAEFA LC+D+GL FIGPPASAI+DMGDKSASKR
Sbjct: 101 NGSSIVEAAIRTGAQAIHPGYGFLSESAEFATLCQDKGLTFIGPPASAIQDMGDKSASKR 160

Query: 280 IMGAAGVPLVPGYHGYEQDIDLMKMEADKIGYPILIKPTHGGGGKICLYKGLASLPYLQI 101
           IMGAAGVPLVPGYHG EQDI+ MK+EADKIGYP+LIKPTHGGGGK               
Sbjct: 161 IMGAAGVPLVPGYHGIEQDIEQMKLEADKIGYPVLIKPTHGGGGK--------------- 205

Query: 100 HICLIFQGMRIVQSPDQFIESFLGAQREAAASF 2
                  GMRIVQSP++F++SF GAQREAAASF
Sbjct: 206 -------GMRIVQSPNEFVDSFFGAQREAAASF 231


>ref|XP_003590600.1| Methylcrotonoyl-CoA carboxylase subunit alpha [Medicago truncatula]
           gi|355479648|gb|AES60851.1| Methylcrotonoyl-CoA
           carboxylase subunit alpha [Medicago truncatula]
          Length = 743

 Score =  315 bits (806), Expect = 7e-84
 Identities = 160/213 (75%), Positives = 176/213 (82%)
 Frame = -1

Query: 640 IEKILIANRGEIACRITTTSKRLGIKTVAVYSDADENSLHVKSADEAVRIGPPPARLSYL 461
           IEKILIANRGEIACRIT T+KRLGI+TVAVYSDAD NSLHV S+DEA+RIGPPPARLSYL
Sbjct: 45  IEKILIANRGEIACRITRTAKRLGIRTVAVYSDADRNSLHVASSDEAIRIGPPPARLSYL 104

Query: 460 NAKQIIKAAHTTGAQAVHPGYGFLSESAEFAQLCEDEGLIFIGPPASAIRDMGDKSASKR 281
           ++  I+ AA  +GAQA+HPGYGFLSESA+FAQLCED G+ FIGPPASAIRDMGDKSASKR
Sbjct: 105 SSSSILDAALRSGAQAIHPGYGFLSESADFAQLCEDNGIAFIGPPASAIRDMGDKSASKR 164

Query: 280 IMGAAGVPLVPGYHGYEQDIDLMKMEADKIGYPILIKPTHGGGGKICLYKGLASLPYLQI 101
           IMGAAGVPLVPGYHG EQDID MK+EAD+IGYP+LIKPTHGGGGK               
Sbjct: 165 IMGAAGVPLVPGYHGDEQDIDKMKLEADQIGYPVLIKPTHGGGGK--------------- 209

Query: 100 HICLIFQGMRIVQSPDQFIESFLGAQREAAASF 2
                  GMRIV +PD+F ESFL AQREAAASF
Sbjct: 210 -------GMRIVHTPDEFAESFLAAQREAAASF 235


>ref|XP_003518909.1| PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha,
           mitochondrial [Glycine max]
          Length = 735

 Score =  313 bits (802), Expect = 2e-83
 Identities = 156/213 (73%), Positives = 177/213 (83%)
 Frame = -1

Query: 640 IEKILIANRGEIACRITTTSKRLGIKTVAVYSDADENSLHVKSADEAVRIGPPPARLSYL 461
           IEKIL+ANRGEIACRIT T++RLGI+TVAVYSDAD +SLHV +ADEA+RIGPPPARLSYL
Sbjct: 37  IEKILVANRGEIACRITRTARRLGIQTVAVYSDADRDSLHVATADEAIRIGPPPARLSYL 96

Query: 460 NAKQIIKAAHTTGAQAVHPGYGFLSESAEFAQLCEDEGLIFIGPPASAIRDMGDKSASKR 281
           N   I+ AA  +GAQA+HPGYGFLSESA+FA+LCE+ GL FIGPPASAIRDMGDKSASKR
Sbjct: 97  NGASIVDAAIRSGAQAIHPGYGFLSESADFAKLCEESGLTFIGPPASAIRDMGDKSASKR 156

Query: 280 IMGAAGVPLVPGYHGYEQDIDLMKMEADKIGYPILIKPTHGGGGKICLYKGLASLPYLQI 101
           IMGAAGVPLVPGYHGY+QDI+ MK+EAD+IGYP+LIKPTHGGGGK               
Sbjct: 157 IMGAAGVPLVPGYHGYDQDIEKMKLEADRIGYPVLIKPTHGGGGK--------------- 201

Query: 100 HICLIFQGMRIVQSPDQFIESFLGAQREAAASF 2
                  GMRIV +PD+F+ESFL AQREAAASF
Sbjct: 202 -------GMRIVHTPDEFVESFLAAQREAAASF 227


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