BLASTX nr result

ID: Coptis23_contig00023091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023091
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]   113   3e-23
emb|CBI29284.3| unnamed protein product [Vitis vinifera]              109   5e-22
ref|XP_002512694.1| conserved hypothetical protein [Ricinus comm...    80   4e-13
ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
gb|ABK25914.1| unknown [Picea sitchensis]                              71   2e-10

>emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]
          Length = 212

 Score =  113 bits (283), Expect = 3e-23
 Identities = 57/126 (45%), Positives = 85/126 (67%)
 Frame = +3

Query: 3   ALLLNGAFIMDNRVRILPLRSIESPPVSYNMHDRTKKNEKQGFIPIAHSIVQTMTSKGCE 182
           ALLLNGA I D+ +RIL L+++   P+    +  T+  EKQG  P+ +S +Q + SK  E
Sbjct: 79  ALLLNGAVIGDSPIRILALQNLAIHPIPDKRNCETQNKEKQGIFPVVNSAIQGIASKSME 138

Query: 183 NLSKAKEVLDEKYKLSEKGRAVTEQTRMAISAAEQTVGRVGEVIVNNEHFSAGALWVSTV 362
             +K  + L+E  KLSEKGRA+  QTR+AI AAE+  G++G  I+NNE+ S G++W+S V
Sbjct: 139 MFNKTADELEENCKLSEKGRALMHQTRLAICAAEKGAGQLGTAIMNNEYVSNGSIWLSGV 198

Query: 363 LSKAAK 380
           + +A+K
Sbjct: 199 VDRASK 204


>emb|CBI29284.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  109 bits (272), Expect = 5e-22
 Identities = 55/120 (45%), Positives = 81/120 (67%)
 Frame = +3

Query: 3   ALLLNGAFIMDNRVRILPLRSIESPPVSYNMHDRTKKNEKQGFIPIAHSIVQTMTSKGCE 182
           ALLLNGA I D+ +RIL L+++   P+    + +T+  EKQG  P+ +S +Q + SK  E
Sbjct: 60  ALLLNGAVIGDSPIRILALQNLAIHPIPDKRNCKTQNKEKQGIFPVVNSAIQGIASKSME 119

Query: 183 NLSKAKEVLDEKYKLSEKGRAVTEQTRMAISAAEQTVGRVGEVIVNNEHFSAGALWVSTV 362
             +K  + L+E  KLSEKGRA+  QTR+AI AAE+  G++G  I+NNE+ S G++W+S V
Sbjct: 120 MFNKTADELEENCKLSEKGRALMHQTRLAICAAEKGAGQLGTAIMNNEYVSNGSIWLSGV 179


>ref|XP_002512694.1| conserved hypothetical protein [Ricinus communis]
           gi|223548655|gb|EEF50146.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 48/111 (43%), Positives = 65/111 (58%)
 Frame = +3

Query: 108 KKNEKQGFIPIAHSIVQTMTSKGCENLSKAKEVLDEKYKLSEKGRAVTEQTRMAISAAEQ 287
           +K+E Q F+    + +QTM  KG E L K K  L E YKLSEK +  T++ R A S A  
Sbjct: 72  QKHEVQEFLASVQAAMQTMALKGVEMLKKVKNELVENYKLSEKVKVPTDRRRSAASTAGG 131

Query: 288 TVGRVGEVIVNNEHFSAGALWVSTVLSKAAKCTAELCSHNKEKDPNSRKQK 440
           T  ++G  I +NE  S GAL +  VL K +K  + L  ++K  +PNSRKQK
Sbjct: 132 TAEQIGGAIKSNEFISGGALRLYGVLDKVSKGLSSL-GNDKRDNPNSRKQK 181


>ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 55/142 (38%), Positives = 69/142 (48%)
 Frame = +3

Query: 3   ALLLNGAFIMDNRVRILPLRSIESPPVSYNMHDRTKKNEKQGFIPIAHSIVQTMTSKGCE 182
           ALLL+ A +    +RIL    IE P       D  K +    F+P     +QT+  K  E
Sbjct: 60  ALLLSDALLGGQPIRILSAHDIEIPITG---PDIRKNHGSSRFVPAVQVAMQTVALKSVE 116

Query: 183 NLSKAKEVLDEKYKLSEKGRAVTEQTRMAISAAEQTVGRVGEVIVNNEHFSAGALWVSTV 362
            LSKA+E L+E YKLSEKGR +  QTR A+  AEQ             + SAGA W+S  
Sbjct: 117 MLSKARE-LEENYKLSEKGRTLALQTRAAVYDAEQAA---------ENYVSAGAGWLSGA 166

Query: 363 LSKAAKCTAELCSHNKEKDPNS 428
           L K +K    L    K   PNS
Sbjct: 167 LDKTSKRVLSL-GTVKRNGPNS 187


>gb|ABK25914.1| unknown [Picea sitchensis]
          Length = 215

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
 Frame = +3

Query: 3   ALLLNGAFIMDNRVRILPLRSIESPPVSYN--MHDRTKKNEKQG---FIPIAH---SIVQ 158
           A+LL GA I+D RVRI+     E     +   M +  ++ + QG   FIP A    ++V 
Sbjct: 58  AVLLTGATIIDQRVRIVQWEGSEEALNRWKKQMMELQEEGDTQGLSSFIPSAGQAVNVVT 117

Query: 159 TMTSKGC----ENLSKAKEVLDEKYK--------LSEKGRAVTEQTRMAISAAEQTVGRV 302
           TM SKG     + LSKA E LD+KY+        L+  G+ V E+++ A+  A Q     
Sbjct: 118 TMLSKGYTLGKDALSKAYE-LDQKYQVIDTAATNLTSFGKFVGEKSKAALIVAGQAACSA 176

Query: 303 GEVIVNNEHFSAGALWVSTVLSKAAKCTAEL 395
           G  +VN+ +FS+GAL VS  L KAAK  A+L
Sbjct: 177 GTAVVNSSYFSSGALMVSGALDKAAKAAADL 207


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