BLASTX nr result

ID: Coptis23_contig00023086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023086
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34821.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002515051.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
ref|XP_002271518.2| PREDICTED: uncharacterized protein LOC100245...   121   7e-26
ref|XP_002526966.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
emb|CBI34823.3| unnamed protein product [Vitis vinifera]              118   4e-25

>emb|CBI34821.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/104 (54%), Positives = 79/104 (75%)
 Frame = +3

Query: 99   LQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLVH 278
            LQQMI+GDR + + SDD  MMKQI  THA DGR++DV+PL  +VEDIL R+TPG + +V 
Sbjct: 851  LQQMIKGDRSMITMSDDNAMMKQIHATHAHDGRQIDVRPLYQLVEDILNRSTPGVDAIV- 909

Query: 279  PTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
             T + +++  +D+T H  F+ M+EAL++TI +ISCEI+CKCS G
Sbjct: 910  TTTETRVEPLEDRTQHAGFIAMIEALSFTIDRISCEIACKCSAG 953



 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/105 (54%), Positives = 77/105 (73%)
 Frame = +3

Query: 96  PLQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLV 275
           PLQQ+I+ DR + + SDD +M+KQI  THAPDGRE DVKPL  +VEDIL RATPG + L+
Sbjct: 82  PLQQLIKHDRSMITMSDDNIMVKQIHATHAPDGREFDVKPLFQLVEDILNRATPGVDPLI 141

Query: 276 HPTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
               Q +++  DD+T+   F+ +LEAL++TI +ISCEI+ K  GG
Sbjct: 142 SAA-QTRIETSDDRTNQASFIALLEALSFTIDRISCEIAYKSLGG 185


>ref|XP_002515051.1| conserved hypothetical protein [Ricinus communis]
           gi|223546102|gb|EEF47605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 701

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/120 (55%), Positives = 78/120 (65%)
 Frame = +3

Query: 51  MATQPHMTNPLQKSQPLQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVV 230
           MA  PH +NP           RG+RH+FSTSDD  MMKQI  THAPDGRE DV+PLLNVV
Sbjct: 1   MAVVPHRSNP-----------RGERHMFSTSDDNAMMKQIQATHAPDGREFDVRPLLNVV 49

Query: 231 EDILQRATPGTEGLVHPTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
           ED+ QRA P       P+  A +    +KT    F  ML+ L+YTI+KISCEI+CKCSGG
Sbjct: 50  EDVFQRAVP-------PSGLATIVQPQEKTLQNGFYEMLDLLSYTINKISCEIACKCSGG 102


>ref|XP_002271518.2| PREDICTED: uncharacterized protein LOC100245845 [Vitis vinifera]
          Length = 780

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/104 (53%), Positives = 76/104 (73%)
 Frame = +3

Query: 99  LQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLVH 278
           LQQMI+GDR + + SDD  MMKQI  THA DGR++DV+PL  +VEDIL R+TPG      
Sbjct: 80  LQQMIKGDRSMITMSDDNAMMKQIHATHAHDGRQIDVRPLYQLVEDILNRSTPG------ 133

Query: 279 PTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
            T + +++  +D+T H  F+ M+EAL++TI +ISCEI+CKCS G
Sbjct: 134 -TTETRVEPLEDRTQHAGFIAMIEALSFTIDRISCEIACKCSAG 176


>ref|XP_002526966.1| conserved hypothetical protein [Ricinus communis]
           gi|223533718|gb|EEF35453.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 792

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/104 (55%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
 Frame = +3

Query: 105 QMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLVHP- 281
           Q+I+GDR LFS+SD+  M KQI  TH+PDGRE DVKPLLN+VE+I  RA P  E L  P 
Sbjct: 94  QLIKGDRLLFSSSDENAMTKQIQATHSPDGREFDVKPLLNIVENIFDRAAPTIESLALPA 153

Query: 282 -TNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
             +QA+ DA DDKT+H  F+ MLE+L++ I +++ EI+ KCS G
Sbjct: 154 AAHQARPDALDDKTYHSSFMAMLESLSFVIDRVASEITYKCSSG 197


>emb|CBI34823.3| unnamed protein product [Vitis vinifera]
          Length = 1392

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/105 (53%), Positives = 75/105 (71%)
 Frame = +3

Query: 96  PLQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLV 275
           PL Q+ R DR + + SDD +MMKQI  THAPDGRE DVKPL  +VEDIL RATPG + L+
Sbjct: 59  PLHQLTRHDRSMITMSDDNIMMKQIHATHAPDGREFDVKPLFQLVEDILNRATPGVDPLI 118

Query: 276 HPTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
               Q +++  DD+TH   F+ +LEAL++TI +I+C+I+ K  GG
Sbjct: 119 SDA-QTRIETSDDRTHQASFIALLEALSFTIDRIACQIAYKSLGG 162



 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 72/104 (69%)
 Frame = +3

Query: 99   LQQMIRGDRHLFSTSDDTVMMKQILGTHAPDGREVDVKPLLNVVEDILQRATPGTEGLVH 278
            L Q+IRG+R     SD+  MMKQI  TH PDGREVDVKPL  +VEDIL RA+P  + L  
Sbjct: 761  LTQLIRGERGRIKLSDENAMMKQIYATHTPDGREVDVKPLFQLVEDILSRASPAVDPL-F 819

Query: 279  PTNQAQLDAFDDKTHHVDFLGMLEALAYTIHKISCEISCKCSGG 410
             T Q +++ +DDKT    F+ MLEAL++TI +++CEI+ K S G
Sbjct: 820  LTAQTRVETWDDKTQQASFIAMLEALSFTIDRVACEITYKSSSG 863


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