BLASTX nr result

ID: Coptis23_contig00023083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023083
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305194.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-39
ref|XP_002333987.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-38
ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloproteas...    96   4e-38
ref|XP_002517441.1| ATP binding protein, putative [Ricinus commu...    95   4e-38
ref|XP_002268565.2| PREDICTED: probable mitochondrial chaperone ...    97   4e-38

>ref|XP_002305194.1| predicted protein [Populus trichocarpa] gi|222848158|gb|EEE85705.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 99.8 bits (247), Expect(2) = 6e-39
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = -2

Query: 167 GRMDKHIELSYCSFEGFKVLAKNYLDIESHHLFGVIEQLLGETQMTPADVAENLM 3
           GRMDKHIELSYC FE FKVLAKNYL++ESH +FG IE+LLGET+MTPADVAENLM
Sbjct: 387 GRMDKHIELSYCCFEAFKVLAKNYLELESHEMFGKIEELLGETKMTPADVAENLM 441



 Score = 86.3 bits (212), Expect(2) = 6e-39
 Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
 Frame = -1

Query: 447 ELDPLQKKAKE--ESSTKDSKVTLSGLLNFIDGLWSASGGERLIVFTTNHVEQLDPALIR 274
           E DP+ KK KE  E     SKVTLSGLLNFIDGLWSA GGER+IVFTTN+V++LDPALIR
Sbjct: 326 EKDPVSKKKKEAEEERKSGSKVTLSGLLNFIDGLWSACGGERIIVFTTNYVDKLDPALIR 385


>ref|XP_002333987.1| predicted protein [Populus trichocarpa] gi|222839463|gb|EEE77800.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 98.6 bits (244), Expect(2) = 1e-38
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -2

Query: 167 GRMDKHIELSYCSFEGFKVLAKNYLDIESHHLFGVIEQLLGETQMTPADVAENLM 3
           GRMDKHIELSYC FE FKVLAKNYL++ESH +FG I++LLGET+MTPADVAENLM
Sbjct: 387 GRMDKHIELSYCCFEAFKVLAKNYLELESHEMFGKIDELLGETKMTPADVAENLM 441



 Score = 86.3 bits (212), Expect(2) = 1e-38
 Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
 Frame = -1

Query: 447 ELDPLQKKAKE--ESSTKDSKVTLSGLLNFIDGLWSASGGERLIVFTTNHVEQLDPALIR 274
           E DP+ KK KE  E     SKVTLSGLLNFIDGLWSA GGER+IVFTTN+V++LDPALIR
Sbjct: 326 EKDPVSKKKKEAEEERKSGSKVTLSGLLNFIDGLWSACGGERIIVFTTNYVDKLDPALIR 385


>ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
           vinifera]
          Length = 528

 Score = 95.9 bits (237), Expect(2) = 4e-38
 Identities = 45/55 (81%), Positives = 48/55 (87%)
 Frame = -2

Query: 167 GRMDKHIELSYCSFEGFKVLAKNYLDIESHHLFGVIEQLLGETQMTPADVAENLM 3
           GRMDKHIELSYC FE FKVLAKNYLD++SHHLF  I +LL ET MTPADVAENLM
Sbjct: 386 GRMDKHIELSYCCFEAFKVLAKNYLDLDSHHLFASIRRLLEETNMTPADVAENLM 440



 Score = 87.4 bits (215), Expect(2) = 4e-38
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = -1

Query: 441 DPLQKKAKEESSTKDSKVTLSGLLNFIDGLWSASGGERLIVFTTNHVEQLDPALIR 274
           +P+ KK KE  S K+SKVTLSGLLNFIDGLWSA G ERLIVFTTNHVE+LDPALIR
Sbjct: 330 NPILKKGKEGES-KESKVTLSGLLNFIDGLWSACGEERLIVFTTNHVEKLDPALIR 384


>ref|XP_002517441.1| ATP binding protein, putative [Ricinus communis]
           gi|223543452|gb|EEF44983.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 523

 Score = 94.7 bits (234), Expect(2) = 4e-38
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = -2

Query: 167 GRMDKHIELSYCSFEGFKVLAKNYLDIESHHLFGVIEQLLGETQMTPADVAENLM 3
           GRMDKHIE+SYC FE FKVLAKNYLD+ESH L+G I +LL ET MTPADVAENLM
Sbjct: 391 GRMDKHIEMSYCCFEAFKVLAKNYLDVESHELYGKISKLLEETNMTPADVAENLM 445



 Score = 88.6 bits (218), Expect(2) = 4e-38
 Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
 Frame = -1

Query: 441 DPLQKKAK--EESSTKDSKVTLSGLLNFIDGLWSASGGERLIVFTTNHVEQLDPALIR 274
           DP+ KK K  E+ S K SKVTLSGLLNFIDG+WSA GGER+IVFTTN+VE+LDPALIR
Sbjct: 332 DPVSKKKKKDEDESNKGSKVTLSGLLNFIDGIWSACGGERIIVFTTNYVEKLDPALIR 389


>ref|XP_002268565.2| PREDICTED: probable mitochondrial chaperone BCS1-B-like isoform 1
           [Vitis vinifera]
          Length = 481

 Score = 97.1 bits (240), Expect(2) = 4e-38
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = -2

Query: 167 GRMDKHIELSYCSFEGFKVLAKNYLDIESHHLFGVIEQLLGETQMTPADVAENLM 3
           GRMDKHIELSYCSFE FKVLAKNYL+++SHHLF  IE+LLGE+++TPADVAE+LM
Sbjct: 372 GRMDKHIELSYCSFESFKVLAKNYLELDSHHLFDTIERLLGESKVTPADVAEHLM 426



 Score = 86.3 bits (212), Expect(2) = 4e-38
 Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
 Frame = -1

Query: 447 ELDPLQKKAKEESST--KDSKVTLSGLLNFIDGLWSASGGERLIVFTTNHVEQLDPALIR 274
           E DP++K+AK   S   K SKVTLSGLLNFIDGLWSAS GERLIVFTTN++E+LDPALIR
Sbjct: 311 EKDPIKKQAKVRDSDEGKTSKVTLSGLLNFIDGLWSASKGERLIVFTTNYMEKLDPALIR 370


Top