BLASTX nr result

ID: Coptis23_contig00023080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023080
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...   115   5e-24
ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   112   2e-23
ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...    96   4e-18
ref|XP_002331605.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
           gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
           glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/84 (64%), Positives = 69/84 (82%)
 Frame = -3

Query: 253 DLKSILPFLPLVLRSSSLFWPSQVVKALKSLAKGPTHCNVASGEIFFLAVEDIRNSLGLS 74
           DLKS++PFLPLV+RSS+L WPSQVV+ LK L++GP   NV SGE+ F A+ D+RNSL LS
Sbjct: 6   DLKSVIPFLPLVIRSSALSWPSQVVETLKELSRGPDFSNVNSGELLFYAISDLRNSLSLS 65

Query: 73  SHSLASNAGQGYSLFFDELMTSVE 2
           +HSLA +A QGY+LFFDEL++  E
Sbjct: 66  THSLAPSAQQGYALFFDELISRAE 89


>ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
           gi|449505627|ref|XP_004162526.1| PREDICTED:
           poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
          Length = 550

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = -3

Query: 253 DLKSILPFLPLVLRSSSLFWPSQVVKALKSLAKGPTHCNVASGEIFFLAVEDIRNSLGLS 74
           DL SILPFLPL+LRSS+LFWPSQVV+ LKS+A GP H  V SGE  F ++ +IRNSL LS
Sbjct: 12  DLNSILPFLPLLLRSSTLFWPSQVVETLKSMAAGPDHSGVNSGEALFRSISNIRNSLSLS 71

Query: 73  SHSLASNAGQGYSLFFDELMTSVE 2
           +H LAS++ +GY+LFFD+LM+  E
Sbjct: 72  NHRLASSSQRGYALFFDKLMSETE 95


>ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|222852614|gb|EEE90161.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DLKSILPFLPLVLRSSSLFWPSQVVKALKSLAKGPTHCNVASGEIFFLAVEDIRNSLGLS 74
           DLKS+LPFLPL+LRSS+LFWPSQVV+ LK+L+KGP +  V +GE+ F A+ +IR+SL L 
Sbjct: 6   DLKSMLPFLPLLLRSSNLFWPSQVVELLKTLSKGPFYSKVDTGELLFNAISNIRDSLALP 65

Query: 73  S-HSLASNAGQGYSLFFDELMTSVE 2
           S H L+  A +GY+LFFDEL++  E
Sbjct: 66  SLHRLSPFAHEGYALFFDELISREE 90


>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
           gi|296084375|emb|CBI24763.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/84 (50%), Positives = 65/84 (77%)
 Frame = -3

Query: 253 DLKSILPFLPLVLRSSSLFWPSQVVKALKSLAKGPTHCNVASGEIFFLAVEDIRNSLGLS 74
           DL+SILP+L +V+  SS+ WPS V++ LK++++GP H  + SGE+ FLA+ D+R+SL LS
Sbjct: 6   DLRSILPYLGVVVEGSSVLWPSPVIEPLKAISRGPDHSGIHSGELLFLAISDLRHSLSLS 65

Query: 73  SHSLASNAGQGYSLFFDELMTSVE 2
           S  L+++A  GY+LFFD+L++  E
Sbjct: 66  SQRLSASAPHGYALFFDKLLSRPE 89


>ref|XP_002331605.1| predicted protein [Populus trichocarpa] gi|222874001|gb|EEF11132.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/85 (58%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DLKSILPFLPLVLRSSSLFWPSQVVKALKSLAKGPTHCNVASGEIFFLAVEDIRNSLGLS 74
           DLKS+LPFLPL+L SS+LFWPSQVVK+L++L+KGP +  V SGE+ F A+  IR+SL L 
Sbjct: 6   DLKSMLPFLPLLLGSSNLFWPSQVVKSLETLSKGPLYSKVDSGELLFDAISHIRDSLALP 65

Query: 73  S-HSLASNAGQGYSLFFDELMTSVE 2
           S   +A  A  GY+LFFDEL++  E
Sbjct: 66  SLQPVAPFAHGGYALFFDELISRAE 90


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