BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023076
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   154   6e-35
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   147   8e-33
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   142   2e-31
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   142   2e-31
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   139   1e-30

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  154 bits (388), Expect = 6e-35
 Identities = 129/409 (31%), Positives = 193/409 (47%), Gaps = 10/409 (2%)
 Frame = -1

Query: 1297 EILSK--LCFADLYRFGGVCKPWKSLCGSLKFRNHLQ----WLIVPPPPSINSNKTMVYQ 1136
            EI+SK    ++D      VC  W+      K  NHL     WL++P   S  SN++    
Sbjct: 14   EIISKGLTIYSDYLYSRAVCHAWRFSIP--KTPNHLPPQLPWLMLPQSQS-QSNQS---- 66

Query: 1135 DENVGFYSLCDGKVYKAKIPQLCNRRICASFLGGWLMTIHENSEVQLFNPLSTRPPLNLP 956
                 F+SL   K +   +P++  R+       GWLM + +   + L NPL TR  L+LP
Sbjct: 67   --RRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPL-TRAKLSLP 123

Query: 955  PLDKFPGVQRKFKKQVCFEFPKLFYTGTRSPYPGIFAFPSTYMRDSYVGKVAVSSTSMTS 776
            PL  FP V       +  E+      G R             MRDS++ KV +SS+ +  
Sbjct: 124  PLSSFPNVISFNYSDIGREYALRNLLGER------VTVSLRQMRDSFIRKVVLSSSPLKD 177

Query: 775  GT-VIMAIQSLTQSLAYYKIGSNKKAWLPATPNQKEFHFHDVTYYRGKFYAVQASGPVVV 599
               V++AI + T  LAY + G   K+W     N + F   DV +  G FYAV  +G +V+
Sbjct: 178  NNFVVIAILNQTDDLAYCRNGD--KSW-SLVENARSF-CEDVIFVNGMFYAVNKAGQIVI 233

Query: 598  IHGLDTIPYAERFISDHPERSKLADLTYILESAGDLLVLFRSVVRHKGAEEANDKYPHWP 419
                D    + R       R    D+ Y++ S  +LL++ R +      +   D  PH  
Sbjct: 234  C---DISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHP-DMEPHLI 289

Query: 418  HKTVGFKVLKLEFGSPNRWVELKTLGDCALFVGYNSSFSLPASTFSGCKPNHIYFTDNLW 239
            ++T+ F+V +L++  P +W+ + TLGD ALF+G NSS SL A+ FSGC  N IY+TD+  
Sbjct: 290  YRTIRFEVFRLDWNGP-QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYL 348

Query: 238  XXXXXXXXXXXXXGIFNLEDGSIQNF-LYPPD--AILVLPPPIWFAANP 101
                         GIF L D +I+    YP +  + L   PP+W + NP
Sbjct: 349  DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  147 bits (370), Expect = 8e-33
 Identities = 128/411 (31%), Positives = 189/411 (45%), Gaps = 12/411 (2%)
 Frame = -1

Query: 1297 EILSK--LCFADLYRFGGVCKPWKSLCGSLKFRNHLQ----WLIVPPPPSINSNKTMVYQ 1136
            EI+SK    ++D   F  VC  WKS     K  NHL     WL++P   S  S+      
Sbjct: 14   EIISKKITIYSDYLHFQAVCHAWKSSIP--KTPNHLPPQLPWLLLPQSQSNQSSYR---- 67

Query: 1135 DENVGFYSLCDGKVYKAKIPQLCNRRICASFLGGWLMTIHENSEVQLFNPLSTRPPLNLP 956
                 F++L   K +   +P+  +R+       GWL+ + ++  + + NPL TR  ++LP
Sbjct: 68   ----AFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPL-TRRKIHLP 122

Query: 955  PLDKFPGVQRKFKKQVCFEFPKLFYTGTRSPYPGIFAFPSTYMRDSYVGKVAVSSTSMTS 776
             +  FP V       V  E+  +   G R+            MRD ++ KV +SS+ +  
Sbjct: 123  AISSFPNVVSFDYANVGREYLLVNPQGERN------TASLRQMRDGFIKKVVMSSSPLEK 176

Query: 775  GT---VIMAIQSLTQSLAYYKIGSNKKAWLPATPNQKEFHFHDVTYYRGKFYAVQASGPV 605
                 V MAI   T  LAY K G   + W     N + F   DV Y+ G FYAV  +G +
Sbjct: 177  KGDFFVAMAILCSTGDLAYCKNGD--ECW-NIVENSRSFS-EDVIYFNGLFYAVNKAGQI 232

Query: 604  VVIHGLDTIPYAERFISDHPERSKLADLTYILESAGDLLVLFRSVVRHKGAEEANDKYPH 425
            VV       P    FI     R    D+ Y++ S   LL++ R +       + + ++  
Sbjct: 233  VVCDVNGNSPKVS-FIET--PRQIGGDMQYLVSSGDGLLLVTRYL-------DLDVEFDI 282

Query: 424  WPHKTVGFKVLKLEFGSPNRWVELKTLGDCALFVGYNSSFSLPASTFSGCKPNHIYFTDN 245
            + +KT  F+V KL+   P RW  + +LGD  LF+G NSS +L AS  SGC  + IY+TD+
Sbjct: 283  FIYKTARFEVFKLDLNGP-RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD 341

Query: 244  LWXXXXXXXXXXXXXGIFNLEDGSIQNF-LYPPDAI--LVLPPPIWFAANP 101
                           GIF L DGSI+    YP ++   L  PPP+W + NP
Sbjct: 342  YSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  142 bits (358), Expect = 2e-31
 Identities = 119/394 (30%), Positives = 182/394 (46%), Gaps = 2/394 (0%)
 Frame = -1

Query: 1276 FADLYRFGGVCKPWKSLCGSLKFR--NHLQWLIVPPPPSINSNKTMVYQDENVGFYSLCD 1103
            + D  RF  VC  W++            L WL++P     ++++          F+SL  
Sbjct: 22   YTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP---------FFSLSL 72

Query: 1102 GKVYKAKIPQLCNRRICASFLGGWLMTIHENSEVQLFNPLSTRPPLNLPPLDKFPGVQRK 923
             K +  ++P+  +RR       GWL+ + E  E+ L NPL TR  ++LPPL  FP V R 
Sbjct: 73   NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL-TRSKVHLPPLSTFPNVVRF 131

Query: 922  FKKQVCFEFPKLFYTGTRSPYPGIFAFPSTYMRDSYVGKVAVSSTSMTSGTVIMAIQSLT 743
                V  E+        R+    ++      MRDS++ K  +SS S  +G+  +A+  L 
Sbjct: 132  NFADVGREY------ALRTSSGDVYTRSLKKMRDSFIKKTILSS-SPANGSDFIAVVILN 184

Query: 742  QSLAYYKIGSNKKAWLPATPNQKEFHFHDVTYYRGKFYAVQASGPVVVIHGLDTIPYAER 563
            Q+        +  +W      Q   +  DV ++RG FYAV   G + V     + P    
Sbjct: 185  QTGDLALCRKSDDSWTFLEDAQS--YAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVS- 241

Query: 562  FISDHPERSKLADLTYILESAGDLLVLFRSVVRHKGAEEANDKYPHWPHKTVGFKVLKLE 383
             I + P++    DL Y++ES  +LL++ R +      E       +   +T  F+V +L+
Sbjct: 242  -IIEMPQQFG-GDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIY---RTTRFQVCRLD 296

Query: 382  FGSPNRWVELKTLGDCALFVGYNSSFSLPASTFSGCKPNHIYFTDNLWXXXXXXXXXXXX 203
              +P RW  + +LGD ALF+G N S SL +  F GCK N IY+TD+              
Sbjct: 297  LKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQD 355

Query: 202  XGIFNLEDGSIQNFLYPPDAILVLPPPIWFAANP 101
             GIFNLEDGSI+  L      +  PPP+W   NP
Sbjct: 356  LGIFNLEDGSIEP-LPCSHFRIRWPPPLWVTPNP 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  142 bits (357), Expect = 2e-31
 Identities = 121/396 (30%), Positives = 185/396 (46%), Gaps = 4/396 (1%)
 Frame = -1

Query: 1276 FADLYRFGGVCKPWKSLCGSLKFR--NHLQWLIVPPPPSINSNKTMVYQDENVGFYSLCD 1103
            + D  RF  VC  W++            L WL++P     ++++          F+SL  
Sbjct: 22   YTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP---------FFSLSL 72

Query: 1102 GKVYKAKIPQLCNRRICASFLGGWLMTIHENSEVQLFNPLSTRPPLNLPPLDKFPGVQRK 923
             K +  ++P+  +RR       GWL+ + E  E+ L NPL TR  ++LPPL  FP V R 
Sbjct: 73   NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL-TRSKVHLPPLSTFPNVVRF 131

Query: 922  FKKQVCFEFPKLFYTGTRSPYPGIFAFPSTYMRDSYVGKVAVSSTSMTSGTVIMAIQSLT 743
                V  E+        R+    ++      MRDS++ K  +SS S  +G+  +A+  L 
Sbjct: 132  NFADVGREY------ALRTSSGDVYTRSLKKMRDSFIKKTILSS-SPANGSDFIAVVILN 184

Query: 742  QS--LAYYKIGSNKKAWLPATPNQKEFHFHDVTYYRGKFYAVQASGPVVVIHGLDTIPYA 569
            Q+  LA  +   +   +L    +  E    DV ++RG FYAV   G + V     + P  
Sbjct: 185  QTGDLALCRKSDDSWTFLEDAQSYSE----DVIFHRGLFYAVNKYGSIAVCDVSGSSPRV 240

Query: 568  ERFISDHPERSKLADLTYILESAGDLLVLFRSVVRHKGAEEANDKYPHWPHKTVGFKVLK 389
               I + P++    DL Y++ES  +LL++ R +      E       +   +T  F+V +
Sbjct: 241  S--IIEMPQQFG-GDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIY---RTTRFQVCR 294

Query: 388  LEFGSPNRWVELKTLGDCALFVGYNSSFSLPASTFSGCKPNHIYFTDNLWXXXXXXXXXX 209
            L+  +P RW  + +LGD ALF+G N S SL +  F GCK N IY+TD+            
Sbjct: 295  LDSKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 208  XXXGIFNLEDGSIQNFLYPPDAILVLPPPIWFAANP 101
               GIFNLEDGSI+  L      +  PPP+W   NP
Sbjct: 354  QDLGIFNLEDGSIEP-LPCSHFRIRWPPPLWVTPNP 388


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  139 bits (351), Expect = 1e-30
 Identities = 121/424 (28%), Positives = 186/424 (43%), Gaps = 32/424 (7%)
 Frame = -1

Query: 1276 FADLYRFGGVCKPWKSLCGSLKFRNH-----LQWLIVPPPPSINSNKTMVYQDENVGFYS 1112
            + D      VCK W S   ++  + H     L WL++P   +  +++         GFY+
Sbjct: 22   YVDYISTRAVCKSWWS---AIPKKPHDLLCQLPWLLLPYHKNNPNHR---------GFYN 69

Query: 1111 LCDGKVYKAKIPQLCNRRICASFLGGWLMTIHENSEVQLFNPLSTRPPLNLPPLDKFPGV 932
            L DGK Y  ++P+   +R C S   GWL+ + +   + L NPL T+  + LP L  FP  
Sbjct: 70   LADGKTYHLELPETIEKRCCGSS-HGWLVMVEDTPSIFLLNPL-TKARIELPSLSTFP-- 125

Query: 931  QRKFKKQVCFEFPKLF--YTGTRSPYPGIFAFPSTYMRDSYVGKVAVSSTSMTSGTVIMA 758
               F  +V +E  +    Y  T++            +R++Y+ K  VS    T    +MA
Sbjct: 126  --YFPTEVVYENSRNINEYFNTKA---------KLRIRETYIRKAIVSEDPSTGNFAVMA 174

Query: 757  IQSL---TQSLAYYKIGSNKKAWLPATPNQKEFHFHDVTYYRGKFYAVQASGPVVVIHGL 587
            I      T+++A+ K G     W       ++ H+ DV ++RGKFYAV   G V +    
Sbjct: 175  IYKTINSTENIAFCKSGD--ATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICI-T 231

Query: 586  DTIPYAERFISDHPERSKLADLT-YILESAGDLLVLFRSVVRHKGAEEANDKYPHWPHKT 410
            D  P +   ++D P    L     + L S  + L+L     +++G+      Y +  HK 
Sbjct: 232  DINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRGSG-----YEYQTHK- 285

Query: 409  VGFKVLKLEFGSPNRWVELKTLGDCALFVGYNSSFSLPASTFSGCKPNHIYFTDNLWXXX 230
              F V KL+  S N W+EL  LGD   F+G+N   S+    +     N IYFTD+ +   
Sbjct: 286  --FMVYKLDASSSN-WLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTDDKFIVG 342

Query: 229  XXXXXXXXXXGIFNLEDGSIQN--------------FLYPPDAIL-------VLPPPIWF 113
                      GIFNL+D S+Q               F+Y  +  L       +LPPPIW 
Sbjct: 343  SDFPWEGHDYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYERSLKRDRSSFILPPPIWV 402

Query: 112  AANP 101
              NP
Sbjct: 403  TINP 406