BLASTX nr result

ID: Coptis23_contig00023069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023069
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003328767.1| hAT family dimerization domain-containing pr...    66   9e-15
ref|XP_003321621.1| hAT family dimerization domain-containing pr...    66   3e-14
ref|XP_003333370.1| hAT family dimerization domain-containing pr...    66   7e-14
ref|XP_003307584.1| Ac transposase [Puccinia graminis f. sp. tri...    62   1e-13
ref|XP_003327143.1| Ac transposase [Puccinia graminis f. sp. tri...    62   1e-13

>ref|XP_003328767.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
          Length = 627

 Score = 65.9 bits (159), Expect(2) = 9e-15
 Identities = 26/58 (44%), Positives = 44/58 (75%)
 Frame = -1

Query: 397 WKLHKRVLSFLVLPAPHTGRAISDAMYANLLSWGICDRIGTITLDNASNNDSDVSQLK 224
           W L+KR++SF  LPAPHTG AI++ +   ++ W I +++G IT+DNAS+ND  +++++
Sbjct: 229 WSLNKRIISFKELPAPHTGLAIAEQLINTIVEWKILNKVGAITVDNASSNDVAINRVR 286



 Score = 38.9 bits (89), Expect(2) = 9e-15
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = -2

Query: 186 HLRCTTHVMNLIVKAGLKHVEVSLDIIREM*NISSLLKVNWKSFLRTVNL 37
           H+RC  H++NL+VK GLK V  +++ IRE    S       + F   +NL
Sbjct: 305 HVRCAAHIINLVVKDGLKIVSSAVNKIRESVRYSKSTSSRKQLFQEAINL 354


>ref|XP_003321621.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
          Length = 756

 Score = 66.2 bits (160), Expect(2) = 3e-14
 Identities = 27/58 (46%), Positives = 42/58 (72%)
 Frame = -1

Query: 397 WKLHKRVLSFLVLPAPHTGRAISDAMYANLLSWGICDRIGTITLDNASNNDSDVSQLK 224
           WKL KR++SF  LP PHTG+AI + + A ++ W + D+I  IT+DNAS+ND  + +++
Sbjct: 495 WKLKKRLISFKELPTPHTGKAIGEQLIATIVEWKLVDKISFITVDNASSNDLAIDRVR 552



 Score = 37.0 bits (84), Expect(2) = 3e-14
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -2

Query: 207 ILH*ELCHLRCTTHVMNLIVKAGLKHVEVSLDIIRE 100
           +L+ +  H+RC  H++NL+VK GLK V  S+  IR+
Sbjct: 564 VLNGDFFHVRCAAHIINLVVKDGLKGVTQSIVKIRD 599


>ref|XP_003333370.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
          Length = 674

 Score = 66.2 bits (160), Expect(2) = 7e-14
 Identities = 27/58 (46%), Positives = 42/58 (72%)
 Frame = -1

Query: 397 WKLHKRVLSFLVLPAPHTGRAISDAMYANLLSWGICDRIGTITLDNASNNDSDVSQLK 224
           WKL KR++SF  LP PHTG+AI + + A ++ W + D+I  IT+DNAS+ND  + +++
Sbjct: 247 WKLKKRLISFKELPTPHTGKAIGEQLIATIVEWKLVDKISFITVDNASSNDLAIDRVR 304



 Score = 35.4 bits (80), Expect(2) = 7e-14
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -2

Query: 207 ILH*ELCHLRCTTHVMNLIVKAGLKHVEVSL----DIIREM*NISSLLKVNWKSFLRTVN 40
           +L+ +  H+RC  H++NL+VK GLK V  S+    D +R     S L K  +K  +R+ +
Sbjct: 316 VLNGDFFHVRCAAHIINLVVKDGLKGVTQSIVKICDSVRYS-KSSPLRKQEFKDAIRSSH 374

Query: 39  L 37
           +
Sbjct: 375 M 375


>ref|XP_003307584.1| Ac transposase [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 767

 Score = 61.6 bits (148), Expect(2) = 1e-13
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -1

Query: 397 WKLHKRVLSFLVLPAPHTGRAISDAMYANLLSWGICDRIGTITLDNASNNDSDVSQL 227
           W L+KR+L+F  LP PHTG AI+D +   +  W I D++  IT+DNAS ND  ++++
Sbjct: 312 WTLNKRLLAFKELPTPHTGLAIADQLLTTIAEWKIADKVAFITVDNASANDLAIARV 368



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -2

Query: 186 HLRCTTHVMNLIVKAGLKHVEVSLDIIRE 100
           H+RC  H++NLIVK GLK+V  S+  IR+
Sbjct: 388 HVRCAAHIINLIVKDGLKNVSASISKIRD 416


>ref|XP_003327143.1| Ac transposase [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
          Length = 693

 Score = 61.6 bits (148), Expect(2) = 1e-13
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -1

Query: 397 WKLHKRVLSFLVLPAPHTGRAISDAMYANLLSWGICDRIGTITLDNASNNDSDVSQL 227
           W L+KR+L+F  LP PHTG AI+D +   +  W I D++  IT+DNAS ND  ++++
Sbjct: 238 WTLNKRLLAFKELPTPHTGLAIADQLLTTIAEWKIADKVAFITVDNASANDLAIARV 294



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -2

Query: 186 HLRCTTHVMNLIVKAGLKHVEVSLDIIRE 100
           H+RC  H++NLIVK GLK+V  S+  IR+
Sbjct: 314 HVRCAAHIINLIVKDGLKNVSASISKIRD 342


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