BLASTX nr result

ID: Coptis23_contig00023041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023041
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143285.1| PREDICTED: histone H2B.4-like [Cucumis sativ...   175   4e-42
gb|ABB72812.1| histone H2B-like protein [Solanum tuberosum]           175   4e-42
gb|AFK49087.1| unknown [Lotus japonicus]                              175   4e-42
gb|AFK45369.1| unknown [Lotus japonicus]                              175   4e-42
gb|AFK45166.1| unknown [Lotus japonicus]                              175   4e-42

>ref|XP_004143285.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
           gi|449482391|ref|XP_004156268.1| PREDICTED: histone
           H2B.4-like [Cucumis sativus]
          Length = 139

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -3

Query: 379 VETYKIYIFKVLKQVHPDIGISSKVMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 200
           VETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE
Sbjct: 49  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 108

Query: 199 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 107
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 109 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 139


>gb|ABB72812.1| histone H2B-like protein [Solanum tuberosum]
          Length = 146

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -3

Query: 379 VETYKIYIFKVLKQVHPDIGISSKVMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 200
           VETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE
Sbjct: 56  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 115

Query: 199 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 107
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 116 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 146


>gb|AFK49087.1| unknown [Lotus japonicus]
          Length = 140

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -3

Query: 379 VETYKIYIFKVLKQVHPDIGISSKVMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 200
           VETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE
Sbjct: 50  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 109

Query: 199 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 107
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 110 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140


>gb|AFK45369.1| unknown [Lotus japonicus]
          Length = 109

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -3

Query: 379 VETYKIYIFKVLKQVHPDIGISSKVMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 200
           VETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE
Sbjct: 19  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 78

Query: 199 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 107
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 79  IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 109


>gb|AFK45166.1| unknown [Lotus japonicus]
          Length = 139

 Score =  175 bits (444), Expect = 4e-42
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -3

Query: 379 VETYKIYIFKVLKQVHPDIGISSKVMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 200
           VETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE
Sbjct: 49  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 108

Query: 199 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 107
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 109 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 139


Top