BLASTX nr result

ID: Coptis23_contig00023038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023038
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ...    94   7e-17
ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group] g...    73   1e-10
ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [S...    73   1e-10
ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group] g...    72   2e-10
gb|EEE56995.1| hypothetical protein OsJ_06738 [Oryza sativa Japo...    72   2e-10

>ref|XP_003614469.1| Helicase-like protein [Medicago truncatula]
            gi|355515804|gb|AES97427.1| Helicase-like protein
            [Medicago truncatula]
          Length = 377

 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 43/95 (45%), Positives = 58/95 (61%)
 Frame = +1

Query: 718  HNCARGYDDSSSIATHRLPPPRNCSKCRAKLFNREPPSLCCSNGTISLPPMVAPAELVSL 897
            HN AR + ++  +    LP PR C +C  KLF +E   +CC NG + +  + AP EL  L
Sbjct: 105  HNNARNFKNTVMMINALLPTPRTCRRCNTKLFYKETQYMCCKNGNVIVTQVAAPEELQQL 164

Query: 898  FTSPTTVGVDFRKNIRAYNHVFSFTSMGVVIDDEL 1002
            F+  T  G  FR+NIR YNHV SFTS+GV ID+ +
Sbjct: 165  FSDTTIEGRHFRQNIRGYNHVMSFTSLGVHIDETM 199


>ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group]
            gi|255670879|dbj|BAF08718.2| Os02g0463700 [Oryza sativa
            Japonica Group]
          Length = 1221

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 38/86 (44%), Positives = 47/86 (54%)
 Frame = +1

Query: 757  ATHRLPPPRNCSKCRAKLFNREPPSLCCSNGTISLPPMVAPAELVSLFTSPTTVGVDFRK 936
            +TH L P +NC  C AK F  EP   CC +G I L     P EL+ L+TS  +    FR 
Sbjct: 245  STHMLEPVKNCEFCDAKKFEHEPKGFCCRSGQIRLANQDTPPELMRLWTSNDSDAQHFRN 304

Query: 937  NIRAYNHVFSFTSMGVVIDDELADSR 1014
            NIR +N  FSFTS+   +D E  D R
Sbjct: 305  NIRFFNGHFSFTSLYCHLDRETTDIR 330


>ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [Sorghum bicolor]
            gi|241941669|gb|EES14814.1| hypothetical protein
            SORBIDRAFT_07g009320 [Sorghum bicolor]
          Length = 1342

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 37/85 (43%), Positives = 47/85 (55%)
 Frame = +1

Query: 760  THRLPPPRNCSKCRAKLFNREPPSLCCSNGTISLPPMVAPAELVSLFTSPTTVGVDFRKN 939
            TH L P  +C  C AK F +EPP  CC NG + L   V P +L+ L+TS       FR N
Sbjct: 257  THMLKPVPDCHHCGAKRFPKEPPGFCCRNGKVELNAPVVPNQLMRLWTSSDADARHFRNN 316

Query: 940  IRAYNHVFSFTSMGVVIDDELADSR 1014
            IR +N  FSFTS+   +D   A+ R
Sbjct: 317  IRFFNGHFSFTSLYCRLDSATANIR 341


>ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group]
            gi|255670903|dbj|BAF08763.2| Os02g0480100 [Oryza sativa
            Japonica Group]
          Length = 1466

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 37/84 (44%), Positives = 49/84 (58%)
 Frame = +1

Query: 757  ATHRLPPPRNCSKCRAKLFNREPPSLCCSNGTISLPPMVAPAELVSLFTSPTTVGVDFRK 936
            +T+ L P  +C  C AK F  EPPS CC +G I+L     P EL+ L+TS       FR 
Sbjct: 318  STNVLKPEPDCKHCGAKRFQYEPPSFCCRDGKINLVQNETPPELMRLWTSSDPDAKHFRD 377

Query: 937  NIRAYNHVFSFTSMGVVIDDELAD 1008
            NIR +N  FSFT++GV +D   A+
Sbjct: 378  NIRYFNGHFSFTTLGVSLDKAFAN 401


>gb|EEE56995.1| hypothetical protein OsJ_06738 [Oryza sativa Japonica Group]
          Length = 512

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 37/84 (44%), Positives = 49/84 (58%)
 Frame = +1

Query: 757  ATHRLPPPRNCSKCRAKLFNREPPSLCCSNGTISLPPMVAPAELVSLFTSPTTVGVDFRK 936
            +T+ L P  +C  C AK F  EPPS CC +G I+L     P EL+ L+TS       FR 
Sbjct: 318  STNVLKPEPDCKHCGAKRFQYEPPSFCCRDGKINLVQNETPPELMRLWTSSDPDAKHFRD 377

Query: 937  NIRAYNHVFSFTSMGVVIDDELAD 1008
            NIR +N  FSFT++GV +D   A+
Sbjct: 378  NIRYFNGHFSFTTLGVSLDKAFAN 401


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