BLASTX nr result

ID: Coptis23_contig00023029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023029
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156892.1| PREDICTED: protein GAMETE EXPRESSED 1-like [...    60   2e-07
ref|XP_003552884.1| PREDICTED: uncharacterized protein LOC100814...    58   7e-07
ref|XP_002533535.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002866097.1| hypothetical protein ARALYDRAFT_495632 [Arab...    57   2e-06
ref|XP_003525627.1| PREDICTED: uncharacterized protein LOC100792...    56   3e-06

>ref|XP_004156892.1| PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus]
          Length = 588

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/73 (38%), Positives = 38/73 (52%)
 Frame = +1

Query: 196 FVVVSLLQQNVAYSWGWFSSSSPTGGNPSYRPEISGGDVAEFSLETVSSSKGTKYLEKAK 375
           F+V+ L       SW WFSSSS +  + S    + GG  AEF++E     KG + +E AK
Sbjct: 6   FLVILLFALPNCESWNWFSSSSSSSSSASSFNRVEGGSGAEFAIEGFDDQKGVRRIENAK 65

Query: 376 QRAATPNSCWRKA 414
            +    NSCW  A
Sbjct: 66  NKLTVSNSCWESA 78


>ref|XP_003552884.1| PREDICTED: uncharacterized protein LOC100814301 [Glycine max]
          Length = 593

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
 Frame = +1

Query: 169 HHLSLLVYTFVVVSLLQQNVAYSWGWFSSSSPTGGNPSYRPEISG---GDVAEFSLETVS 339
           H   LLV  F+++S L +    SWGWFSSS  T  +        G   G  AEFS+E+ +
Sbjct: 3   HQGRLLV--FILLSFLLRGE--SWGWFSSSKETPSSDKTHTTNEGNFRGSSAEFSIESFN 58

Query: 340 SSKGTKYLEKAKQRAATPNSCWRKA 414
             KG K +E AK++  + NSCW+ A
Sbjct: 59  DHKGVKLIENAKKKMISSNSCWQNA 83


>ref|XP_002533535.1| conserved hypothetical protein [Ricinus communis]
           gi|223526602|gb|EEF28852.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = +1

Query: 160 SKMHHLSLLVYTFVVVSLLQQNVAYSWGWFSSS-----SPTGGNPSYRPEISGGDVAEFS 324
           S  H L LL+    V    Q     SWGWF SS     S    NPS R       VAEFS
Sbjct: 3   SNFHVLFLLILMSNVTPRCQ-----SWGWFFSSTENPSSSAAHNPSQRNYPFASSVAEFS 57

Query: 325 LETVSSSKGTKYLEKAKQRAATPNSCWRKA 414
           ++ +   KG K LE AK++    NSCW+ A
Sbjct: 58  IDGLKDDKGMKLLENAKKKLDISNSCWQNA 87


>ref|XP_002866097.1| hypothetical protein ARALYDRAFT_495632 [Arabidopsis lyrata subsp.
           lyrata] gi|297311932|gb|EFH42356.1| hypothetical protein
           ARALYDRAFT_495632 [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
 Frame = +1

Query: 166 MHHLSLLVYTFVVVSLLQQNVA-YSWGWFSSSSPTGGNPSYRPEISGGDVA--EFSLETV 336
           M  LS     F+++ LL   +  +SWGWFSSSS +    +Y    S    +  +FS+E  
Sbjct: 1   MDRLSRKFLMFLLIVLLDSPLTCHSWGWFSSSSSSSAKDTYSSSFSRSYKSNPDFSMEVF 60

Query: 337 SSSKGTKYLEKAKQRAATPNSCWRKA 414
           S  K  + L+ AK +   PNSCW+ A
Sbjct: 61  SDQKAVRVLKDAKNKLDGPNSCWQNA 86


>ref|XP_003525627.1| PREDICTED: uncharacterized protein LOC100792191 [Glycine max]
          Length = 591

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/83 (36%), Positives = 44/83 (53%)
 Frame = +1

Query: 166 MHHLSLLVYTFVVVSLLQQNVAYSWGWFSSSSPTGGNPSYRPEISGGDVAEFSLETVSSS 345
           M H S L+   +   LL+     SWGWFSSS  T      +     G  AEFS+++ +  
Sbjct: 1   MDHRSRLLVLILFSFLLRGE---SWGWFSSSKETPSGDKTQAGNFKGSSAEFSVDSFNDH 57

Query: 346 KGTKYLEKAKQRAATPNSCWRKA 414
           KG K ++ AK++  + NSCW+ A
Sbjct: 58  KGVKLIQNAKKKMISSNSCWQNA 80


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