BLASTX nr result

ID: Coptis23_contig00023005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023005
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317493.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
gb|AFK48699.1| unknown [Lotus japonicus]                              169   2e-40
ref|XP_002285059.1| PREDICTED: uncharacterized protein LOC100252...   169   2e-40
ref|XP_002285056.1| PREDICTED: uncharacterized protein LOC100252...   169   2e-40
ref|XP_002528255.1| conserved hypothetical protein [Ricinus comm...   167   8e-40

>ref|XP_002317493.1| predicted protein [Populus trichocarpa] gi|222860558|gb|EEE98105.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  172 bits (436), Expect = 3e-41
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = +2

Query: 8   GPNQIVKLAKQFYDVHYKIFTTRYGSQIMDIVEFPIKLVLSPFTLAFDVVGSAPRGFGVP 187
           G ++++K  KQF D+ YK+FT RYG Q++DI EFPIKLVLSPFTLAFD+ GSAPRGFGVP
Sbjct: 4   GTDRLIKSVKQFADLQYKLFTARYGQQVIDIFEFPIKLVLSPFTLAFDIAGSAPRGFGVP 63

Query: 188 QFISHLSFSAIFAVATLGTYDIALELGKKVICQRNCRTCSGWQALR 325
           + +S LS+++IF VATLGTYDIALE+GKKVICQRNC+TC+GWQALR
Sbjct: 64  ELVSKLSYASIFVVATLGTYDIALEMGKKVICQRNCQTCNGWQALR 109


>gb|AFK48699.1| unknown [Lotus japonicus]
          Length = 240

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/103 (73%), Positives = 93/103 (90%)
 Frame = +2

Query: 17  QIVKLAKQFYDVHYKIFTTRYGSQIMDIVEFPIKLVLSPFTLAFDVVGSAPRGFGVPQFI 196
           ++VK  K+F +V YK+F+TRYG  ++DI++FPIKLVLSPFTLAFD+ GSAPRGFGVP+ I
Sbjct: 5   RLVKAVKRFVEVRYKVFSTRYGQNVIDILDFPIKLVLSPFTLAFDIAGSAPRGFGVPELI 64

Query: 197 SHLSFSAIFAVATLGTYDIALELGKKVICQRNCRTCSGWQALR 325
           S LS +++FA+ATLGTYDIALELGKKVICQRNCRTC+GWQALR
Sbjct: 65  SKLSAASVFAIATLGTYDIALELGKKVICQRNCRTCNGWQALR 107


>ref|XP_002285059.1| PREDICTED: uncharacterized protein LOC100252134 isoform 2 [Vitis
           vinifera]
          Length = 403

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/106 (72%), Positives = 95/106 (89%)
 Frame = +2

Query: 8   GPNQIVKLAKQFYDVHYKIFTTRYGSQIMDIVEFPIKLVLSPFTLAFDVVGSAPRGFGVP 187
           G +++++  KQF D+ YK F+ R+G Q++DI+EFPIKLVLSPFTLA+D+ GSAPRGFG+P
Sbjct: 4   GTDRMMRNLKQFADLQYKQFSARHGQQLIDILEFPIKLVLSPFTLAYDIAGSAPRGFGIP 63

Query: 188 QFISHLSFSAIFAVATLGTYDIALELGKKVICQRNCRTCSGWQALR 325
           +FIS LSFSAIF VATLGTYDIAL+LGKKV+CQRNCRTC+GWQALR
Sbjct: 64  EFISKLSFSAIFVVATLGTYDIALDLGKKVLCQRNCRTCNGWQALR 109


>ref|XP_002285056.1| PREDICTED: uncharacterized protein LOC100252134 isoform 1 [Vitis
           vinifera] gi|302142984|emb|CBI20279.3| unnamed protein
           product [Vitis vinifera]
          Length = 423

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/106 (72%), Positives = 95/106 (89%)
 Frame = +2

Query: 8   GPNQIVKLAKQFYDVHYKIFTTRYGSQIMDIVEFPIKLVLSPFTLAFDVVGSAPRGFGVP 187
           G +++++  KQF D+ YK F+ R+G Q++DI+EFPIKLVLSPFTLA+D+ GSAPRGFG+P
Sbjct: 4   GTDRMMRNLKQFADLQYKQFSARHGQQLIDILEFPIKLVLSPFTLAYDIAGSAPRGFGIP 63

Query: 188 QFISHLSFSAIFAVATLGTYDIALELGKKVICQRNCRTCSGWQALR 325
           +FIS LSFSAIF VATLGTYDIAL+LGKKV+CQRNCRTC+GWQALR
Sbjct: 64  EFISKLSFSAIFVVATLGTYDIALDLGKKVLCQRNCRTCNGWQALR 109


>ref|XP_002528255.1| conserved hypothetical protein [Ricinus communis]
           gi|223532341|gb|EEF34140.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 8   GPNQIVKLAKQFYDVHYKIFTTRYGSQIMDIVEFPIKLVLSPFTLAFDVVGSAPRGFGVP 187
           G  ++VK  KQF D  YK  T+RYG Q++DI EFPIK+VLSPFTLAFD+ GSAPRGFGVP
Sbjct: 4   GTERLVKSVKQFADTQYKHLTSRYGQQLIDIFEFPIKVVLSPFTLAFDIAGSAPRGFGVP 63

Query: 188 QFISHLSFSAIFAVATLGTYDIALELGKKVICQRNCRTCSGWQALR 325
           + IS LS+ ++FAVATLGTYDIALELGKKVICQRNC TC+GWQALR
Sbjct: 64  ELISKLSYLSVFAVATLGTYDIALELGKKVICQRNCHTCNGWQALR 109


Top