BLASTX nr result

ID: Coptis23_contig00023003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023003
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250...    91   1e-16
ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806...    88   8e-16
gb|AFK41935.1| unknown [Lotus japonicus]                               79   5e-13
ref|XP_003636963.1| hypothetical protein MTR_065s0044 [Medicago ...    78   7e-13
ref|XP_002320975.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13

>ref|XP_002276108.1| PREDICTED: uncharacterized protein LOC100250421 [Vitis vinifera]
          Length = 89

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/60 (76%), Positives = 50/60 (83%)
 Frame = +2

Query: 2   PRSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEA 181
           P+  VKAT  L  E YSVNAS GTISEQLVSVKEES+ ILK+FITKHNVPNDVPDE +EA
Sbjct: 11  PKPRVKATLNLGPETYSVNASKGTISEQLVSVKEESMGILKEFITKHNVPNDVPDEPLEA 70


>ref|XP_003552725.1| PREDICTED: uncharacterized protein LOC100806261 [Glycine max]
          Length = 88

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +2

Query: 5   RSHVKATFCLNSEVYSVNASSGTISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEA 181
           R H+KATF L SE YSV A+ G++SEQLVS+KEES+ ILKDFITKHNVP+DVPDE +EA
Sbjct: 9   RPHLKATFRLGSESYSVQANKGSLSEQLVSLKEESMTILKDFITKHNVPHDVPDEPLEA 67


>gb|AFK41935.1| unknown [Lotus japonicus]
          Length = 91

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   RSHVKATFCLNSEVYSVNASSGT-ISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEA 181
           +S VKAT  L +E YSV A+ G+ +SEQLVS+KEES+ +LKDFITKHNVP DVPDE +EA
Sbjct: 12  KSQVKATLRLGTESYSVQATKGSSLSEQLVSLKEESMAVLKDFITKHNVPQDVPDESLEA 71


>ref|XP_003636963.1| hypothetical protein MTR_065s0044 [Medicago truncatula]
           gi|355502898|gb|AES84101.1| hypothetical protein
           MTR_065s0044 [Medicago truncatula]
          Length = 94

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   PRSHVKATFCLNSEVYSVNASSGT-ISEQLVSVKEESVCILKDFITKHNVPNDVPDELVE 178
           PR  V ATF L +E YSV A+ G+ +SEQLV++KE+S+ +LKDFITKHN+P DVPDE +E
Sbjct: 12  PRPQVNATFRLGTESYSVQATKGSSLSEQLVNMKEQSMAVLKDFITKHNIPQDVPDESLE 71

Query: 179 A 181
           A
Sbjct: 72  A 72


>ref|XP_002320975.1| predicted protein [Populus trichocarpa] gi|222861748|gb|EEE99290.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/57 (66%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
 Frame = +2

Query: 14  VKATFCLNSEVYSVNASSG-TISEQLVSVKEESVCILKDFITKHNVPNDVPDELVEA 181
           VKAT  L SE+Y+VN+ +G T+SEQLVS+KE+S+ ILK+FITKHNVP+DVPDE+ E+
Sbjct: 15  VKATLKLGSELYAVNSCNGNTVSEQLVSMKEQSMSILKEFITKHNVPHDVPDEIAES 71


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