BLASTX nr result

ID: Coptis23_contig00022493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022493
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera]    62   4e-09
emb|CAN73983.1| hypothetical protein VITISV_017985 [Vitis vinifera]    60   2e-08
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    60   2e-08
emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]    60   2e-08
emb|CAN60818.1| hypothetical protein VITISV_033221 [Vitis vinifera]    60   2e-08

>emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera]
          Length = 982

 Score = 62.0 bits (149), Expect(2) = 4e-09
 Identities = 31/80 (38%), Positives = 47/80 (58%)
 Frame = -1

Query: 277 GPEIPMIQFADDTXXXXXXXXXXXXXVKAILIIFEAVSVLKTNMSKTSIFEVCKVDSMNS 98
           G +IP + FADDT             +  +L+ FEA+S L+ N+ K+ I  V +V+++ +
Sbjct: 328 GRKIPHLLFADDTLVFCEASEDQMVHLSWLLMWFEAISGLRINLDKSEILPVGRVENLEN 387

Query: 97  LALVMGCSIGTLPCRYLGLP 38
           LAL  GC +G LP  YLG+P
Sbjct: 388 LALEAGCKVGRLPSSYLGIP 407



 Score = 23.5 bits (49), Expect(2) = 4e-09
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LGTPLRANYKNRRVWE 3
           LG PL AN+K+  VW+
Sbjct: 404 LGIPLGANHKSVAVWD 419


>emb|CAN73983.1| hypothetical protein VITISV_017985 [Vitis vinifera]
          Length = 862

 Score = 60.1 bits (144), Expect(2) = 2e-08
 Identities = 29/81 (35%), Positives = 48/81 (59%)
 Frame = -1

Query: 280 NGPEIPMIQFADDTXXXXXXXXXXXXXVKAILIIFEAVSVLKTNMSKTSIFEVCKVDSMN 101
           +G  +  + FADDT             +  +L+ FEA+S L+ N+ K+ IF + +V+++ 
Sbjct: 570 DGAVVTHLLFADDTLVFCEASQDQMAHLSWLLMWFEAISGLRINLDKSEIFPIGRVENLE 629

Query: 100 SLALVMGCSIGTLPCRYLGLP 38
           +LAL +GC +G LP  YLG+P
Sbjct: 630 ALALEVGCKVGRLPNSYLGIP 650



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LGTPLRANYKNRRVWE 3
           LG PL AN+K+  VW+
Sbjct: 647 LGIPLGANHKSVAVWD 662


>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = -1

Query: 280  NGPEIPMIQFADDTXXXXXXXXXXXXXVKAILIIFEAVSVLKTNMSKTSIFEVCKVDSMN 101
            NG  +  + FADDT             +  +L+ FEA+S L+ N+ K+ I  V +V+++ 
Sbjct: 985  NGALVSHLLFADDTLVFCEASEDQMVHLSWLLMWFEAISGLRINLDKSEILPVGRVENLE 1044

Query: 100  SLALVMGCSIGTLPCRYLGLP 38
            +LAL  GC +G LP  YLG+P
Sbjct: 1045 NLALEAGCKVGRLPSSYLGIP 1065



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 50   LGTPLRANYKNRRVWE 3
            LG PL AN+K+  VW+
Sbjct: 1062 LGIPLGANHKSVAVWD 1077


>emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]
          Length = 1109

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = -1

Query: 280 NGPEIPMIQFADDTXXXXXXXXXXXXXVKAILIIFEAVSVLKTNMSKTSIFEVCKVDSMN 101
           NG  +  + FADDT             +  +L+ FEA+S L+ N+ K+ I  V +V+++ 
Sbjct: 575 NGALVSHLLFADDTLVFCEASEDQMVHLSWLLMWFEAISGLRINLDKSEILPVGRVENLE 634

Query: 100 SLALVMGCSIGTLPCRYLGLP 38
           +LAL  GC +G LP  YLG+P
Sbjct: 635 NLALEAGCKVGXLPSSYLGIP 655



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LGTPLRANYKNRRVWE 3
           LG PL AN+K+  VW+
Sbjct: 652 LGIPLGANHKSVAVWD 667


>emb|CAN60818.1| hypothetical protein VITISV_033221 [Vitis vinifera]
          Length = 400

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = -1

Query: 280 NGPEIPMIQFADDTXXXXXXXXXXXXXVKAILIIFEAVSVLKTNMSKTSIFEVCKVDSMN 101
           NG  +  + FADDT             +  +L+ FEA+S L+ N+ K+ I  V +V+++ 
Sbjct: 28  NGALVSHLLFADDTLVFCEASEDQMVHLSWLLMWFEAISGLRINLDKSEILPVGRVENLE 87

Query: 100 SLALVMGCSIGTLPCRYLGLP 38
           +LAL  GC +G LP  YLG+P
Sbjct: 88  NLALEAGCKVGRLPSSYLGIP 108



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 50  LGTPLRANYKNRRVWE 3
           LG PL AN+K+  VW+
Sbjct: 105 LGIPLGANHKSVAVWD 120


Top