BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022487
         (1512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   365   2e-98
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   364   4e-98
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   361   2e-97
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   361   2e-97
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   361   2e-97

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  365 bits (936), Expect = 2e-98
 Identities = 195/488 (39%), Positives = 280/488 (57%), Gaps = 1/488 (0%)
 Frame = +2

Query: 2    SPMQSAFVQQRQITDNIVIAHEILHSIQTKKR-KHGLMAIKLDMSKAFDRVNWGTVISML 178
            S  QSAFV  R ITDN +IA E+ HS++ + R + G +A+KLDMSKA+DRV WG +  +L
Sbjct: 538  SENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLL 597

Query: 179  GLLGFNDHWCTMIYQCISSVNFSILLNGSPEGFFKSKRGLRQGDPLSPMLFIICMEIFSR 358
              +GF+  W  +I  C+SSV++S ++NG   G     RGLR GDPLSP LFI+  + FS+
Sbjct: 598  LTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSK 657

Query: 359  LLQHKETNGKIHGAKISRQGPVISHLLFADDVFLFCRATISDALEIVDTIKLFSSITGQT 538
            ++Q K    ++HGAK SR GPVISHL FAD   LF RA+  +   IV+ + L+   +GQ 
Sbjct: 658  MIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQASGQK 717

Query: 539  INYDKSGVLFSKHLPYKFXXXXXXXXXXXXXXXXDSYLGAPLFLGQPKTQLFDHLINRLT 718
            INYDKS V FSK +                      YLG P   G+ +T +FD L++R+ 
Sbjct: 718  INYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLMDRIW 777

Query: 719  SRVNGWKNKLLSQAGRTVLIKSVTSAIPVYQMSCFKLPKKITNKMNAIQRDFWWGKKDNA 898
             ++ GWK KLLS+AG+ +L+KSV  AIP Y M  +KLP  I  K+++    FWWG  D  
Sbjct: 778  KKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWWGSSDTQ 837

Query: 899  KKILYLKSWDSICLPKRMGGLGIRDFSTANEACSGKLAWRLLSDPPELWGQVLKNKYFPH 1078
            ++I + K+WDS+C  K  GG+G RD    N+A  G+ AWRL+ +P  L  +V+K KY+ +
Sbjct: 838  RRI-HWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSN 896

Query: 1079 SKGSQPPLLKKGASWLWKSCHASISSIMNNAVWDIGDGSNINIWTEPWVPKNGGVVHIFG 1258
                  P L    S+ W+S  +S + +    VW IG+G+N+ IW +PWV    G      
Sbjct: 897  HDFLDAP-LGVSTSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWVLDELG--RFIT 953

Query: 1259 PRPRMAPESVSELFLPNTKSWNIHLLETLFPAFIVQYIMNVYVKDDATNASLFWGGTKNG 1438
                     VSEL   +   W + L+ET+F    ++ I+++ +        L W  TKN 
Sbjct: 954  SEKHGNLNMVSELIDFDRMEWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWAFTKNA 1013

Query: 1439 SFSIKSFY 1462
             +S+K+ Y
Sbjct: 1014 HYSVKTAY 1021


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  364 bits (934), Expect = 4e-98
 Identities = 196/488 (40%), Positives = 280/488 (57%), Gaps = 1/488 (0%)
 Frame = +2

Query: 2    SPMQSAFVQQRQITDNIVIAHEILHSIQTKKR-KHGLMAIKLDMSKAFDRVNWGTVISML 178
            S  QSAFV  R ITDN +IA E+ HS++ + R + G +A+KLDMSKA+DRV WG +  +L
Sbjct: 538  SENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLL 597

Query: 179  GLLGFNDHWCTMIYQCISSVNFSILLNGSPEGFFKSKRGLRQGDPLSPMLFIICMEIFSR 358
              +GF+  W  +I + +SSV +S ++NGS  G     RGLRQGDPLSP LFI+  + FS+
Sbjct: 598  LTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSK 657

Query: 359  LLQHKETNGKIHGAKISRQGPVISHLLFADDVFLFCRATISDALEIVDTIKLFSSITGQT 538
            ++Q K  + ++HGAK SR GP ISHL FADD  LF RA   +   IVD +  +   +GQ 
Sbjct: 658  MIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQK 717

Query: 539  INYDKSGVLFSKHLPYKFXXXXXXXXXXXXXXXXDSYLGAPLFLGQPKTQLFDHLINRLT 718
            INY+KS V +S+ +                    + YLG P   G+ K  +FD LI+R+ 
Sbjct: 718  INYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIW 777

Query: 719  SRVNGWKNKLLSQAGRTVLIKSVTSAIPVYQMSCFKLPKKITNKMNAIQRDFWWGKKDNA 898
             ++ GWK KLLS+AG+ VL+KSV  AIP Y M  +K P  I  K+ +    FWWG  D  
Sbjct: 778  KKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQ 837

Query: 899  KKILYLKSWDSICLPKRMGGLGIRDFSTANEACSGKLAWRLLSDPPELWGQVLKNKYFPH 1078
            +KI + K+WDS+C  K  GG+G +D +  N+A  G+ AWRL  +P  L G+V+K KYFP+
Sbjct: 838  RKI-HWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPN 896

Query: 1079 SKGSQPPLLKKGASWLWKSCHASISSIMNNAVWDIGDGSNINIWTEPWVPKNGGVVHIFG 1258
                  P L   +S+ W S  +S + +    +W +G+GS IN+W++PWV   GG      
Sbjct: 897  CDFLNAP-LGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEGG--RFLT 953

Query: 1259 PRPRMAPESVSELFLPNTKSWNIHLLETLFPAFIVQYIMNVYVKDDATNASLFWGGTKNG 1438
              P  +   VSEL   +   W   LLE+      ++ I+   +        L W  TK+ 
Sbjct: 954  STPHASIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFTKDA 1013

Query: 1439 SFSIKSFY 1462
            ++S+K+ Y
Sbjct: 1014 TYSVKTAY 1021


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  361 bits (927), Expect = 2e-97
 Identities = 191/489 (39%), Positives = 278/489 (56%), Gaps = 1/489 (0%)
 Frame = +2

Query: 2    SPMQSAFVQQRQITDNIVIAHEILHSIQTKKRKH-GLMAIKLDMSKAFDRVNWGTVISML 178
            SP QSAFV  R I+DNI+IA+E+ H ++ K+    G  A KLDMSKA+DRV W  +  M+
Sbjct: 735  SPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMM 794

Query: 179  GLLGFNDHWCTMIYQCISSVNFSILLNGSPEGFFKSKRGLRQGDPLSPMLFIICMEIFSR 358
              LGF+  W  +I +C+S+V + I +NG     F  +RGLRQGDPLSP LF++C E FS 
Sbjct: 795  LKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSA 854

Query: 359  LLQHKETNGKIHGAKISRQGPVISHLLFADDVFLFCRATISDALEIVDTIKLFSSITGQT 538
            LL   E  G++HG +I +  P +SHLLFADD  + CRA   +A ++   ++++   +GQ 
Sbjct: 855  LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 914

Query: 539  INYDKSGVLFSKHLPYKFXXXXXXXXXXXXXXXXDSYLGAPLFLGQPKTQLFDHLINRLT 718
            IN DKS V+FS +                     + YLG P+F+G+ +T++F +L  R+ 
Sbjct: 915  INKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIW 974

Query: 719  SRVNGWKNKLLSQAGRTVLIKSVTSAIPVYQMSCFKLPKKITNKMNAIQRDFWWGKKDNA 898
             R+ GWK KLLS+AG+ +LIK+V   IP + M CF+L K + ++++ +   +WW  ++  
Sbjct: 975  QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1034

Query: 899  KKILYLKSWDSICLPKRMGGLGIRDFSTANEACSGKLAWRLLSDPPELWGQVLKNKYFPH 1078
             K+ +L SW+ + LPK MGGLG RD    N A   K  WRL+ DP  L  +VL+ KYFP 
Sbjct: 1035 NKMHWL-SWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPL 1093

Query: 1079 SKGSQPPLLKKGASWLWKSCHASISSIMNNAVWDIGDGSNINIWTEPWVPKNGGVVHIFG 1258
                +P       S+ W+S    +  + N  +W +GDGS INIW +PW+P+ G       
Sbjct: 1094 GDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPR-GWSRKPMT 1151

Query: 1259 PRPRMAPESVSELFLPNTKSWNIHLLETLFPAFIVQYIMNVYVKDDATNASLFWGGTKNG 1438
            PR       V EL  P T +W+  LL   F    V  I ++ V  +  +  L W     G
Sbjct: 1152 PRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDV-LAWHFDARG 1210

Query: 1439 SFSIKSFYE 1465
             F++KS Y+
Sbjct: 1211 CFTVKSAYK 1219


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  361 bits (927), Expect = 2e-97
 Identities = 190/485 (39%), Positives = 282/485 (58%), Gaps = 1/485 (0%)
 Frame = +2

Query: 11   QSAFVQQRQITDNIVIAHEILHSIQTKKR-KHGLMAIKLDMSKAFDRVNWGTVISMLGLL 187
            QSAFV  R I+DN +IA EI H+++ +   + GLMA+KLDMSKA+DRV WG +  +L  +
Sbjct: 544  QSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTM 603

Query: 188  GFNDHWCTMIYQCISSVNFSILLNGSPEGFFKSKRGLRQGDPLSPMLFIICMEIFSRLLQ 367
            GF+  W  ++  C+++V++S ++NG   G     RGLRQGDPLSP LFI+  + FS++++
Sbjct: 604  GFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVK 663

Query: 368  HKETNGKIHGAKISRQGPVISHLLFADDVFLFCRATISDALEIVDTIKLFSSITGQTINY 547
             K  + +IHGAK SR GP ISHLLFADD  LF RAT  + L IVD +  + + +GQ INY
Sbjct: 664  QKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINY 723

Query: 548  DKSGVLFSKHLPYKFXXXXXXXXXXXXXXXXDSYLGAPLFLGQPKTQLFDHLINRLTSRV 727
            +KS V FS+ +  +                   YLG P   G+ K  LF  L++R+  ++
Sbjct: 724  EKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKL 783

Query: 728  NGWKNKLLSQAGRTVLIKSVTSAIPVYQMSCFKLPKKITNKMNAIQRDFWWGKKDNAKKI 907
             GWK KLLS+AG+ VLIK+V  A+P Y M  +KLP  +  ++++    FWWG K + +K+
Sbjct: 784  RGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKM 843

Query: 908  LYLKSWDSICLPKRMGGLGIRDFSTANEACSGKLAWRLLSDPPELWGQVLKNKYFPHSKG 1087
             +L SW+ +C PK MGG+G +D +  N+A  GK  WRLL +   L  +V+  KY+PH   
Sbjct: 844  HWL-SWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHG-D 901

Query: 1088 SQPPLLKKGASWLWKSCHASISSIMNNAVWDIGDGSNINIWTEPWVPKNGGVVHIFGPRP 1267
             +   L    S+ W+S   + S ++   +W +GDG+ I+IW+ PWV    G         
Sbjct: 902  VRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEG--RFIKSAR 959

Query: 1268 RMAPESVSELFLPNTKSWNIHLLETLFPAFIVQYIMNVYVKDDATNASLFWGGTKNGSFS 1447
                E V +L     K WN+ L+E  F     Q I+ + +        L W  +K+G++S
Sbjct: 960  VEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYS 1019

Query: 1448 IKSFY 1462
            +K+ Y
Sbjct: 1020 VKTAY 1024


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  361 bits (927), Expect = 2e-97
 Identities = 191/489 (39%), Positives = 278/489 (56%), Gaps = 1/489 (0%)
 Frame = +2

Query: 2    SPMQSAFVQQRQITDNIVIAHEILHSIQTKKRKH-GLMAIKLDMSKAFDRVNWGTVISML 178
            SP QSAFV  R I+DNI+IA+E+ H ++ K+    G  A KLDMSKA+DRV W  +  M+
Sbjct: 731  SPAQSAFVPGRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMM 790

Query: 179  GLLGFNDHWCTMIYQCISSVNFSILLNGSPEGFFKSKRGLRQGDPLSPMLFIICMEIFSR 358
              LGF+  W  +I +C+S+V + I +NG     F  +RGLRQGDPLSP LF++C E FS 
Sbjct: 791  LKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSA 850

Query: 359  LLQHKETNGKIHGAKISRQGPVISHLLFADDVFLFCRATISDALEIVDTIKLFSSITGQT 538
            LL   E  G++HG +I +  P +SHLLFADD  + CRA   +A ++   ++++   +GQ 
Sbjct: 851  LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 910

Query: 539  INYDKSGVLFSKHLPYKFXXXXXXXXXXXXXXXXDSYLGAPLFLGQPKTQLFDHLINRLT 718
            IN DKS V+FS +                     + YLG P+F+G+ +T++F +L  R+ 
Sbjct: 911  INKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIW 970

Query: 719  SRVNGWKNKLLSQAGRTVLIKSVTSAIPVYQMSCFKLPKKITNKMNAIQRDFWWGKKDNA 898
             R+ GWK KLLS+AG+ +LIK+V   IP + M CF+L K + ++++ +   +WW  ++  
Sbjct: 971  QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1030

Query: 899  KKILYLKSWDSICLPKRMGGLGIRDFSTANEACSGKLAWRLLSDPPELWGQVLKNKYFPH 1078
             K+ +L SW+ + LPK MGGLG RD    N A   K  WRL+ DP  L  +VL+ KYFP 
Sbjct: 1031 NKMHWL-SWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPL 1089

Query: 1079 SKGSQPPLLKKGASWLWKSCHASISSIMNNAVWDIGDGSNINIWTEPWVPKNGGVVHIFG 1258
                +P       S+ W+S    +  + N  +W +GDGS INIW +PW+P+ G       
Sbjct: 1090 GDCFRPK-QTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPR-GWSRKPMT 1147

Query: 1259 PRPRMAPESVSELFLPNTKSWNIHLLETLFPAFIVQYIMNVYVKDDATNASLFWGGTKNG 1438
            PR       V EL  P T +W+  LL   F    V  I ++ V  +  +  L W     G
Sbjct: 1148 PRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDV-LAWHFDARG 1206

Query: 1439 SFSIKSFYE 1465
             F++KS Y+
Sbjct: 1207 CFTVKSAYK 1215