BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022486
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    56   3e-06

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -2

Query: 196  SFYLQIWKSNGNPRTELFAWKSIHDIFPTRERLNRIFPIKDQRCVFCRTTVETLHHLLME 17
            S + +IW  +  P+  +F WK++H   P  +RL       D  C+ C T  ET++H+L E
Sbjct: 1040 SLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFE 1099

Query: 16   CPFTR 2
            CP  R
Sbjct: 1100 CPLAR 1104