BLASTX nr result

ID: Coptis23_contig00022475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022475
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA39037.1| glucose transporter [Arabidopsis thaliana]             58   7e-07
ref|NP_172592.1| sugar transporter 1 [Arabidopsis thaliana] gi|2...    58   7e-07
ref|XP_002489031.1| hypothetical protein SORBIDRAFT_0391s002020 ...    58   7e-07
gb|AAN60361.1| unknown [Arabidopsis thaliana]                          58   7e-07
gb|AAM67326.1| glucose transporter [Arabidopsis thaliana]              58   7e-07

>emb|CAA39037.1| glucose transporter [Arabidopsis thaliana]
          Length = 522

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
 Frame = -3

Query: 274 MTTGAFIASSTTTHVGNKQYPGRLTGFVLHACFILTLTALLIGHAFGASGGVITMPYFLK 95
           M  G F+        G K YPG+LT FVL  C +  +  L+ G+  G SGGV +MP FLK
Sbjct: 1   MPAGGFVVGD-----GQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLK 55

Query: 94  FI-------KKDVASTNFYC 56
                    +++ ASTN YC
Sbjct: 56  RFFPSVYRKQQEDASTNQYC 75


>ref|NP_172592.1| sugar transporter 1 [Arabidopsis thaliana]
           gi|21542458|sp|P23586.2|STP1_ARATH RecName: Full=Sugar
           transport protein 1; AltName: Full=Glucose transporter;
           AltName: Full=Hexose transporter 1
           gi|5734730|gb|AAD49995.1|AC007259_8 glucose transporter
           [Arabidopsis thaliana] gi|15809962|gb|AAL06908.1|
           At1g11260/T28P6_18 [Arabidopsis thaliana]
           gi|16604673|gb|AAL24129.1| putative glucose transporter
           protein [Arabidopsis thaliana]
           gi|22136870|gb|AAM91779.1| putative glucose transporter
           protein [Arabidopsis thaliana]
           gi|332190584|gb|AEE28705.1| sugar transporter 1
           [Arabidopsis thaliana]
          Length = 522

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
 Frame = -3

Query: 274 MTTGAFIASSTTTHVGNKQYPGRLTGFVLHACFILTLTALLIGHAFGASGGVITMPYFLK 95
           M  G F+        G K YPG+LT FVL  C +  +  L+ G+  G SGGV +MP FLK
Sbjct: 1   MPAGGFVVGD-----GQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLK 55

Query: 94  FI-------KKDVASTNFYC 56
                    +++ ASTN YC
Sbjct: 56  RFFPSVYRKQQEDASTNQYC 75


>ref|XP_002489031.1| hypothetical protein SORBIDRAFT_0391s002020 [Sorghum bicolor]
           gi|241947331|gb|EES20476.1| hypothetical protein
           SORBIDRAFT_0391s002020 [Sorghum bicolor]
          Length = 151

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = -3

Query: 229 GNKQYPGRLTGFVLHACFILTLTALLIGHAFGASGGVITMPYFLK------FIKKDVAST 68
           G K YPG+LT FVL  C +     L+ G+  G SGGV +M  FL+      F KK  A T
Sbjct: 11  GGKDYPGKLTLFVLLTCIVAATGGLIFGYDIGISGGVTSMDPFLEKFFPEVFRKKQEAKT 70

Query: 67  NFYCTLHDQCLQ 32
           N YC   +Q LQ
Sbjct: 71  NQYCKYDNQLLQ 82


>gb|AAN60361.1| unknown [Arabidopsis thaliana]
          Length = 194

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
 Frame = -3

Query: 274 MTTGAFIASSTTTHVGNKQYPGRLTGFVLHACFILTLTALLIGHAFGASGGVITMPYFLK 95
           M  G F+        G K YPG+LT FVL  C +  +  L+ G+  G SGGV +MP FLK
Sbjct: 1   MPAGGFVVGD-----GQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLK 55

Query: 94  FI-------KKDVASTNFYC 56
                    +++ ASTN YC
Sbjct: 56  RFFPSVYRKQQEDASTNQYC 75


>gb|AAM67326.1| glucose transporter [Arabidopsis thaliana]
          Length = 522

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
 Frame = -3

Query: 274 MTTGAFIASSTTTHVGNKQYPGRLTGFVLHACFILTLTALLIGHAFGASGGVITMPYFLK 95
           M  G F+        G K YPG+LT FVL  C +  +  L+ G+  G SGGV +MP FLK
Sbjct: 1   MPAGGFVVGD-----GQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLK 55

Query: 94  FI-------KKDVASTNFYC 56
                    +++ ASTN YC
Sbjct: 56  RFFPSVYRKQQEDASTNQYC 75


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