BLASTX nr result

ID: Coptis23_contig00022466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022466
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...   199   3e-49
emb|CBI40924.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   181   6e-44
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   176   1e-42

>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score =  199 bits (505), Expect = 3e-49
 Identities = 103/161 (63%), Positives = 122/161 (75%)
 Frame = -1

Query: 490 LLSILCWMMENEVHPDSAATFVSTTSLNCIFSDLIGSLENANESSVLPMLISVRMVMGLY 311
           LLSI  + ++N VH +  ATF S  +   IFSDL+ SLENA E SVLPML SVR+ +GL+
Sbjct: 306 LLSIPYYALKNGVHLEPCATFFSDAAARRIFSDLVESLENAGEGSVLPMLRSVRLALGLF 365

Query: 310 ASERLGPIVFSSDGMKTEMMWDLVRSSWILHVSCKKRKVAHIAALLSSVLHFSVFCDDRM 131
            S +LG +V S  GM  +MMW LVRSSWILHVSC KR+VA IAALLS+VLH SVF D+ M
Sbjct: 366 TSRKLGSVVSSCHGMDAQMMWHLVRSSWILHVSCNKRRVAPIAALLSAVLHSSVFNDEGM 425

Query: 130 HETAENTQGPCKWFIEKIIEEATKSPRTIRLAALHLTGLWL 8
           H T +N  GP KWF+EKI+EE  KSPRTIRLAALHL+GLWL
Sbjct: 426 HVT-DNGPGPLKWFVEKILEEGAKSPRTIRLAALHLSGLWL 465


>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  199 bits (505), Expect = 3e-49
 Identities = 103/161 (63%), Positives = 122/161 (75%)
 Frame = -1

Query: 490 LLSILCWMMENEVHPDSAATFVSTTSLNCIFSDLIGSLENANESSVLPMLISVRMVMGLY 311
           LLSI  + ++N VH +  ATF S  +   IFSDL+ SLENA E SVLPML SVR+ +GL+
Sbjct: 436 LLSIPYYALKNGVHLEPCATFFSDAAARRIFSDLVESLENAGEGSVLPMLRSVRLALGLF 495

Query: 310 ASERLGPIVFSSDGMKTEMMWDLVRSSWILHVSCKKRKVAHIAALLSSVLHFSVFCDDRM 131
            S +LG +V S  GM  +MMW LVRSSWILHVSC KR+VA IAALLS+VLH SVF D+ M
Sbjct: 496 TSRKLGSVVSSCHGMDAQMMWHLVRSSWILHVSCNKRRVAPIAALLSAVLHSSVFNDEGM 555

Query: 130 HETAENTQGPCKWFIEKIIEEATKSPRTIRLAALHLTGLWL 8
           H T +N  GP KWF+EKI+EE  KSPRTIRLAALHL+GLWL
Sbjct: 556 HVT-DNGPGPLKWFVEKILEEGAKSPRTIRLAALHLSGLWL 595


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/163 (59%), Positives = 118/163 (72%)
 Frame = -1

Query: 490 LLSILCWMMENEVHPDSAATFVSTTSLNCIFSDLIGSLENANESSVLPMLISVRMVMGLY 311
           LLSI      N ++ +  + F S +++ CIFSDL+ SL+NA E SVLPML SVR+ +GL 
Sbjct: 464 LLSIPYSAPWNVLNLEDGSLFFSDSAIRCIFSDLVESLDNAGEGSVLPMLRSVRLALGLI 523

Query: 310 ASERLGPIVFSSDGMKTEMMWDLVRSSWILHVSCKKRKVAHIAALLSSVLHFSVFCDDRM 131
           AS +L   V S +G+  +MMW LV SSWILHV+C KR+VA IAALLSSVLH SVF D+ M
Sbjct: 524 ASGKLDSHVSSCNGVDAQMMWRLVNSSWILHVNCNKRRVASIAALLSSVLHRSVFTDEGM 583

Query: 130 HETAENTQGPCKWFIEKIIEEATKSPRTIRLAALHLTGLWLMY 2
           H    N  GP KWF+E +IEE TKSPRTIRLAALHLTGLWL +
Sbjct: 584 H-LINNRPGPLKWFVENVIEEGTKSPRTIRLAALHLTGLWLSH 625


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  181 bits (459), Expect = 6e-44
 Identities = 98/161 (60%), Positives = 113/161 (70%)
 Frame = -1

Query: 490  LLSILCWMMENEVHPDSAATFVSTTSLNCIFSDLIGSLENANESSVLPMLISVRMVMGLY 311
            LLSI  +  EN  H      F S  ++  IFSDL+ SLENA E SVLPML S+R+  GL 
Sbjct: 980  LLSIPHYAFENGPHLVDNRLFFSEAAIRLIFSDLVESLENAGEGSVLPMLRSIRLTFGLL 1039

Query: 310  ASERLGPIVFSSDGMKTEMMWDLVRSSWILHVSCKKRKVAHIAALLSSVLHFSVFCDDRM 131
            AS   G +V S +G+  +MMW LVRSSW+LHVS  KR+VA IAALLSSVLH SVF D+ M
Sbjct: 1040 ASGNSGSLVSSCNGVDAQMMWHLVRSSWMLHVSNNKRRVAAIAALLSSVLHASVFADEAM 1099

Query: 130  HETAENTQGPCKWFIEKIIEEATKSPRTIRLAALHLTGLWL 8
            H T  N  GP KWF+E I+ E TKSPRTIRLAALHLTGLWL
Sbjct: 1100 H-TNNNGPGPLKWFVENILVEGTKSPRTIRLAALHLTGLWL 1139


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  176 bits (447), Expect = 1e-42
 Identities = 93/163 (57%), Positives = 116/163 (71%)
 Frame = -1

Query: 490  LLSILCWMMENEVHPDSAATFVSTTSLNCIFSDLIGSLENANESSVLPMLISVRMVMGLY 311
            LLSI    ++N +  +    F+S  +L  IF+DL+ SLENA ESSVLPML  VR+++ L+
Sbjct: 1065 LLSIPYCALQNGISLEDNNAFLSEATLLQIFNDLVESLENAGESSVLPMLRLVRLILCLF 1124

Query: 310  ASERLGPIVFSSDGMKTEMMWDLVRSSWILHVSCKKRKVAHIAALLSSVLHFSVFCDDRM 131
                 G +V S +G+ +EMMW LV SSWILHVSC KR+VAHIA LLSSVLH S F +  M
Sbjct: 1125 YKGNSGLLVTSCNGVNSEMMWRLVHSSWILHVSCNKRRVAHIAVLLSSVLHSSAFSEINM 1184

Query: 130  HETAENTQGPCKWFIEKIIEEATKSPRTIRLAALHLTGLWLMY 2
            H  ++   GP KWFIEKI+EE TKSPRT RLAALHLTG+WL +
Sbjct: 1185 H-LSDGGPGPLKWFIEKILEEGTKSPRTFRLAALHLTGMWLSH 1226


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