BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022461
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   115   8e-24
ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata sub...    92   5e-17
sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-...    90   3e-16
ref|NP_568800.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    90   3e-16
gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]                89   8e-16

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  115 bits (287), Expect = 8e-24
 Identities = 71/171 (41%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
 Frame = -1

Query: 509 ISDLPDHLRNRIVSLLWFEDAVRTSILSRKWRKVCSSLKHLDFHQQIFGSTHGKFEFKDF 330
           I+DLPD L   I+S L  +DAVRTSILSRKW  +  SL +L+FHQ  F +   +  F + 
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAK--RKIFMNS 97

Query: 329 VYQTLLRRDGLSIDTLNLCVDLGNLSSTHVNSWISFALSRNLKELNLSVFSWGEIEKL-- 156
           V + LL RD  +I+   L   + +  +T   +W+S A++RN+KEL ++ +  GE E    
Sbjct: 98  VERVLLLRDSSNIEKFTLSCGIDD--ATRTRTWVSAAVNRNVKELCVNFYEGGESESFVS 155

Query: 155 PCCLFTCTTLVMLKL-KYISIELPSIIEFPMLKILKLTGVTLPNENSMNRL 6
           P CLFTC TL  LK+  +  + L S I  P LKIL L  V  P+E+S  ++
Sbjct: 156 PLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQI 206


>ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311982|gb|EFH42406.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 59/174 (33%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
 Frame = -1

Query: 515 DRISDLPDHLRNRIVSLLWFEDAVRTSILSRKWRKVCSSLKHLDFHQQIFGSTHGKFEFK 336
           DR+S LPD    +I+S L  +D + TS+LS++WR + + +  L++  ++  +T+ +F   
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVMVTSLLSKRWRFLWTLVPRLNYDLRLHDNTYPRFS-- 63

Query: 335 DFVYQTLLRRDGLSIDTLNLCVDLGNLSST---HVNSWISFALSRNLKELNLSVFSWGEI 165
            FV ++LL     ++++LN  + +G+L  T    V  W+   + R ++ELN+S  S  E 
Sbjct: 64  QFVDRSLLLHKAPTLESLN--ISIGSLCYTAEKDVGVWVRIGVDRFVRELNISYCSGEEP 121

Query: 164 EKLPCCLFTCTTLVMLKLKYIS-IELPSIIEFPMLKILKLTGVTLPNENSMNRL 6
            +LP CLFTCTTL +LKL+ IS ++    + F  +K L L  V   ++ S+ R+
Sbjct: 122 IRLPKCLFTCTTLAVLKLENISLVDASCYVCFQSVKTLHLLDVKYLDDQSLPRI 175


>sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-box protein At5g56700
          Length = 398

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
 Frame = -1

Query: 518 MDRISDLPDHLRNRIVSLLWFEDAVRTSILSRKWRKVCSSLKHLDFHQQIFGSTHGKFEF 339
           M +ISDL D L  +I+S L  ++AV TS LS++W  +   L  L+F+   F         
Sbjct: 1   MAKISDLSDELLVKILSFLPTKEAVSTSCLSKQWEFLWMWLSKLEFY---FSDGSESACL 57

Query: 338 KDFVYQTLLRRDGLSIDTLNLCVDLGNLSSTHVNSWISFALSRNLKELNLSVFSWGEIEK 159
           +DF+ + L       I++L  C   G+L    + SW+  A+SR ++EL++S+        
Sbjct: 58  RDFIAKNLPLHKAPIIESLRFCSFFGSLQPKDLKSWVRIAVSRCVRELSISLHDTTAAVS 117

Query: 158 LPCCLFTCTTLVMLKL--KYISIELPSIIEFPMLKILKLTGVTLPNENSMNRL 6
           LP  L+TC +LV LKL  K + +++P  +  P LK L+L  +   +E+S+  L
Sbjct: 118 LPSSLYTCKSLVTLKLYGKKVLLDVPRTVFLPSLKTLQLERLRYSDEDSLRLL 170


>ref|NP_568800.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75333820|sp|Q9FGQ3.1|FDL37_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At5g53840
           gi|10176949|dbj|BAB10069.1| unnamed protein product
           [Arabidopsis thaliana] gi|67633880|gb|AAY78864.1| F-box
           family protein [Arabidopsis thaliana]
           gi|332009029|gb|AED96412.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 444

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
 Frame = -1

Query: 515 DRISDLPDHLRNRIVSLLWFEDAVRTSILSRKWRKVCSSLKHLDFHQQIFGSTHGKFEFK 336
           +R+S LPDHL   I+S L  +DAVRTSILS +WR +   +  LDF  +   S     EF 
Sbjct: 18  ERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSRELRSFS---EFV 74

Query: 335 DFVYQTLLRRDGLSIDTLNLCV-DLGNLSSTHVNSWISFALSRNLKELNLSVFSWGEIEK 159
            F            I  L +C+ DL    + ++ SWI       ++ +++SVF+      
Sbjct: 75  SFAGSFFYLHKDSYIQKLRVCIYDLAG--NYYLTSWIDLVTRHRIQHIDISVFTCSGFGV 132

Query: 158 LPCCLFTCTTLVMLKLKYISIELPSIIEFPMLKILKLTGVTLPNENSMNRL 6
           +P  L+TC TLV LKL  +++     +  P LKIL L  V   NE +++++
Sbjct: 133 IPLSLYTCDTLVHLKLSRVTMVNVEFVSLPCLKILDLDFVNFTNETTLDKI 183


>gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]
          Length = 526

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 6/177 (3%)
 Frame = -1

Query: 518 MDRISDLPDHLRNRIVSLLWFEDAVRTSILSRKWRKVCSSLKHLDFHQQIFGSTHGKFEF 339
           MD+IS LPD L  +++S L  +DAV TSILS +W+ +   L  L+++ + +  + G+   
Sbjct: 86  MDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQ-GL 144

Query: 338 KDFVYQTLLRRDGLSIDTLNLCV---DLGNLSSTHVNSWISFALS-RNLKELNLSVFSWG 171
             F+  +L      +I++L+L      +G++    +  W+S A+   N++EL+L +F++ 
Sbjct: 145 ARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFA 204

Query: 170 EI-EKLPCCLFTCTTLVMLKLK-YISIELPSIIEFPMLKILKLTGVTLPNENSMNRL 6
           E+  KLP  L  C ++V+LKLK  I +++P  +  P LK L L  VT  + NS++RL
Sbjct: 205 ELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRL 261