BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022453
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [...   221   1e-55
ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis...   221   1e-55
ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-54
ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arab...   215   6e-54
ref|NP_190247.1| uncharacterized protein [Arabidopsis thaliana] ...   213   3e-53

>ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [Glycine max]
          Length = 203

 Score =  221 bits (562), Expect = 1e-55
 Identities = 103/135 (76%), Positives = 116/135 (85%)
 Frame = -3

Query: 433 SSPTHENNIPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGHFLSAEDEKVVVEKL 254
           SS     + P+YR+WKD+E EIL DIEPIV LAK ILH+ RY DG  L+ EDEK +VEKL
Sbjct: 69  SSEARWEDDPDYRKWKDKEKEILSDIEPIVVLAKDILHSRRYMDGARLNEEDEKAIVEKL 128

Query: 253 LAYHPHSEDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPA 74
           LAYHPHSEDK+G GL+SIMVDRHPQ+++SRCLFVVRTDGGWIDFSYQKCLR YIRDKYP 
Sbjct: 129 LAYHPHSEDKIGCGLESIMVDRHPQYRQSRCLFVVRTDGGWIDFSYQKCLREYIRDKYPT 188

Query: 73  YAERFIREHFKRGSG 29
           +AERFIREHFKRGSG
Sbjct: 189 HAERFIREHFKRGSG 203


>ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|302142270|emb|CBI19473.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  221 bits (562), Expect = 1e-55
 Identities = 119/202 (58%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
 Frame = -3

Query: 613 ASLLLRGIPVLR---QRLTQRVSTVRFINWASIKSVFXXXXXXXXXXXXPYFRSPKYNSV 443
           A LLLR +P+LR    RL   + T+    W S                     S    + 
Sbjct: 3   APLLLRAVPLLRLRHHRLAAPLFTLAQRPWCSSTESSRSDVNV----------SYADKNT 52

Query: 442 TKLSSPTHEN----NIPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGHFLSAEDE 275
           T LSS    N    + P++R+WK+RE EIL+DIEPI SL K+ILH+DRY DG  L+AEDE
Sbjct: 53  TVLSSRDPANYPRWDDPDFRKWKNREEEILRDIEPITSLTKEILHSDRYMDGERLTAEDE 112

Query: 274 KVVVEKLLAYHPHSEDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAY 95
           K VVEKLL YHPHSEDK+G GLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKCLRAY
Sbjct: 113 KAVVEKLLIYHPHSEDKIGCGLDCIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAY 172

Query: 94  IRDKYPAYAERFIREHFKRGSG 29
           IRDKYP++A+RFIR HFKR SG
Sbjct: 173 IRDKYPSHADRFIRVHFKRSSG 194


>ref|XP_002326952.1| predicted protein [Populus trichocarpa] gi|222835267|gb|EEE73702.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  217 bits (553), Expect = 1e-54
 Identities = 118/200 (59%), Positives = 136/200 (68%), Gaps = 6/200 (3%)
 Frame = -3

Query: 613 ASLLLRGIPVLRQRLTQ--RVSTVRFI----NWASIKSVFXXXXXXXXXXXXPYFRSPKY 452
           AS L+RG P+LR RL    R +TV  +    +W S                       K 
Sbjct: 3   ASALIRGAPLLRLRLQHHHRFATVLLVPLRRSWCSTAESTPLEEDGVPLSTPAALSLRK- 61

Query: 451 NSVTKLSSPTHENNIPEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGHFLSAEDEK 272
               K SS   +N    YRQWKD EA+I +DIEPI  LAK+I+H+DRY DG  L+ EDEK
Sbjct: 62  --APKNSSWDDQN----YRQWKDEEADIWRDIEPITHLAKEIIHSDRYMDGEQLTDEDEK 115

Query: 271 VVVEKLLAYHPHSEDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYI 92
           VV E+LLAYHP+S+DK+G GLDSIMVDRHPQFK SRCLFVVRTDGGWIDFSYQKCLRAYI
Sbjct: 116 VVAERLLAYHPNSDDKIGCGLDSIMVDRHPQFKNSRCLFVVRTDGGWIDFSYQKCLRAYI 175

Query: 91  RDKYPAYAERFIREHFKRGS 32
           R KYP +AERFI+EHFKRGS
Sbjct: 176 RSKYPTHAERFIKEHFKRGS 195


>ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arabidopsis lyrata subsp.
           lyrata] gi|297323335|gb|EFH53756.1| hypothetical protein
           ARALYDRAFT_905861 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  215 bits (547), Expect = 6e-54
 Identities = 98/125 (78%), Positives = 113/125 (90%)
 Frame = -3

Query: 406 PEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGHFLSAEDEKVVVEKLLAYHPHSED 227
           P+YR+WK+ EAEIL+DIEPI  LAK+ILH+DRY DG  L  EDEK+V+EKLLAYHP+S+D
Sbjct: 78  PDYRKWKNLEAEILRDIEPIALLAKEILHSDRYLDGERLEFEDEKIVMEKLLAYHPYSKD 137

Query: 226 KLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPAYAERFIREH 47
           K+G GLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKCLRAY+RDKYP++AERFIREH
Sbjct: 138 KIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREH 197

Query: 46  FKRGS 32
           FKR S
Sbjct: 198 FKRAS 202


>ref|NP_190247.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6523066|emb|CAB62333.1| putative protein [Arabidopsis
           thaliana] gi|21554240|gb|AAM63315.1| unknown
           [Arabidopsis thaliana] gi|26452933|dbj|BAC43543.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973177|gb|AAO63913.1| unknown protein [Arabidopsis
           thaliana] gi|332644664|gb|AEE78185.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 207

 Score =  213 bits (541), Expect = 3e-53
 Identities = 100/139 (71%), Positives = 119/139 (85%), Gaps = 4/139 (2%)
 Frame = -3

Query: 436 LSSPTHENNI----PEYRQWKDREAEILQDIEPIVSLAKQILHTDRYADGHFLSAEDEKV 269
           ++SP  +N+     P+YR+WK+ EAEIL+DIEPI  LAK+ILH+DRY DG  L  EDEK+
Sbjct: 68  VTSPVVDNSWRYEDPDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKI 127

Query: 268 VVEKLLAYHPHSEDKLGSGLDSIMVDRHPQFKRSRCLFVVRTDGGWIDFSYQKCLRAYIR 89
           V+EKLL YHP+S+DK+G GLD IMVDRHPQF+ SRCLFVVRTDGGWIDFSYQKCLRAY+R
Sbjct: 128 VMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVR 187

Query: 88  DKYPAYAERFIREHFKRGS 32
           DKYP++AERFIREHFKR S
Sbjct: 188 DKYPSHAERFIREHFKRAS 206