BLASTX nr result

ID: Coptis23_contig00022436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022436
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   286   1e-84
emb|CBI18648.3| unnamed protein product [Vitis vinifera]              286   1e-84
ref|XP_002315672.1| ABC transporter family protein [Populus tric...   275   1e-81
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   273   3e-81
ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi...   273   9e-80

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Vitis vinifera]
          Length = 705

 Score =  286 bits (731), Expect(2) = 1e-84
 Identities = 145/181 (80%), Positives = 156/181 (86%)
 Frame = +1

Query: 1   LTASIFSTQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 180
           LTASIFS QSG  VVF  N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSAL
Sbjct: 165 LTASIFSAQSGEIVVFHRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSAL 224

Query: 181 LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMI*RNILPGTGALIYLFILSWPLA 360
           LFQDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I RN+L GTGALIYL +LSWPL 
Sbjct: 225 LFQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLG 284

Query: 361 LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEI*ELG 540
           L T+ ICS L  IML YG+YQKKAA+L QEFTASANEV QETFSL+RTVRVYGTE  E+G
Sbjct: 285 LCTMMICSTLLIIMLLYGRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGTEEQEVG 344

Query: 541 R 543
           R
Sbjct: 345 R 345



 Score = 53.9 bits (128), Expect(2) = 1e-84
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 584 ADISLRQSVAYGFWNLSFNTLYHSTQ 661
           ADISLRQS AYG WNLSFNTLYHSTQ
Sbjct: 354 ADISLRQSAAYGLWNLSFNTLYHSTQ 379


>emb|CBI18648.3| unnamed protein product [Vitis vinifera]
          Length = 587

 Score =  286 bits (731), Expect(2) = 1e-84
 Identities = 145/181 (80%), Positives = 156/181 (86%)
 Frame = +1

Query: 1   LTASIFSTQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 180
           LTASIFS QSG  VVF  N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSAL
Sbjct: 47  LTASIFSAQSGEIVVFHRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSAL 106

Query: 181 LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMI*RNILPGTGALIYLFILSWPLA 360
           LFQDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I RN+L GTGALIYL +LSWPL 
Sbjct: 107 LFQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLG 166

Query: 361 LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEI*ELG 540
           L T+ ICS L  IML YG+YQKKAA+L QEFTASANEV QETFSL+RTVRVYGTE  E+G
Sbjct: 167 LCTMMICSTLLIIMLLYGRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGTEEQEVG 226

Query: 541 R 543
           R
Sbjct: 227 R 227



 Score = 53.9 bits (128), Expect(2) = 1e-84
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 584 ADISLRQSVAYGFWNLSFNTLYHSTQ 661
           ADISLRQS AYG WNLSFNTLYHSTQ
Sbjct: 236 ADISLRQSAAYGLWNLSFNTLYHSTQ 261


>ref|XP_002315672.1| ABC transporter family protein [Populus trichocarpa]
           gi|222864712|gb|EEF01843.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 797

 Score =  275 bits (704), Expect(2) = 1e-81
 Identities = 139/181 (76%), Positives = 153/181 (84%)
 Frame = +1

Query: 1   LTASIFSTQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 180
           LTASIFS Q+ +  VF  N RLL+ LC  +GICSG+RGCCF IANMILVKRMRE LYSAL
Sbjct: 177 LTASIFSAQTATVAVFHRNVRLLVALCVVAGICSGIRGCCFGIANMILVKRMRETLYSAL 236

Query: 181 LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMI*RNILPGTGALIYLFILSWPLA 360
           L QDISFFD+ETVGDLTSRLGSDCQQVSRVIGNDLN+I RN+L  TGALIYL ILSW L 
Sbjct: 237 LLQDISFFDNETVGDLTSRLGSDCQQVSRVIGNDLNLILRNVLQATGALIYLIILSWKLG 296

Query: 361 LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEI*ELG 540
             TL IC+ L+ +ML YGQYQKKAA+LTQEFTASANEV QETFSL+RTVR+YGTE  ELG
Sbjct: 297 SFTLLICTTLAAVMLIYGQYQKKAAKLTQEFTASANEVAQETFSLMRTVRIYGTEKVELG 356

Query: 541 R 543
           R
Sbjct: 357 R 357



 Score = 54.3 bits (129), Expect(2) = 1e-81
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +2

Query: 584 ADISLRQSVAYGFWNLSFNTLYHSTQ 661
           A+ISLRQS AYGFWNLSFNTLYHSTQ
Sbjct: 366 ANISLRQSAAYGFWNLSFNTLYHSTQ 391


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
           gi|355514460|gb|AES96083.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 712

 Score =  273 bits (699), Expect(2) = 3e-81
 Identities = 141/181 (77%), Positives = 152/181 (83%)
 Frame = +1

Query: 1   LTASIFSTQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 180
           LTASIFS Q G   VF GN RLLIL+C TSGICSG+RGC F IANMILVKRMRE LYS+L
Sbjct: 161 LTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIANMILVKRMRETLYSSL 220

Query: 181 LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMI*RNILPGTGALIYLFILSWPLA 360
           L QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I RN+L G G+LIYL ILSWPL 
Sbjct: 221 LLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLG 280

Query: 361 LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEI*ELG 540
           L TL ICS+L+ +ML YG YQKKAARL QE TASAN V QETFSLIRTVRVYGTE  E G
Sbjct: 281 LCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRTVRVYGTEEEEHG 340

Query: 541 R 543
           R
Sbjct: 341 R 341



 Score = 54.7 bits (130), Expect(2) = 3e-81
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +2

Query: 584 ADISLRQSVAYGFWNLSFNTLYHSTQ 661
           ADISLRQS AYGFWN SFNTLYHSTQ
Sbjct: 350 ADISLRQSAAYGFWNFSFNTLYHSTQ 375


>ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297333157|gb|EFH63575.1| ATTAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  273 bits (697), Expect(2) = 9e-80
 Identities = 138/181 (76%), Positives = 150/181 (82%)
 Frame = +1

Query: 1   LTASIFSTQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 180
           LTASIFS QSG   VF+ N +LL+ LC TSGICSG+RGC F IANMILVKRMRE LYS L
Sbjct: 160 LTASIFSAQSGDIAVFRRNVKLLVTLCVTSGICSGIRGCFFGIANMILVKRMRETLYSTL 219

Query: 181 LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMI*RNILPGTGALIYLFILSWPLA 360
           LFQDISFFDS+TVGDLTSRLGSDCQQVSRVIGNDLNMI RN+L GTGALIYL ILSWPL 
Sbjct: 220 LFQDISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYLLILSWPLG 279

Query: 361 LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEI*ELG 540
           L TL IC +L+ +M  YG YQKK A+L QE TASANEV QET+SL+RTVRVYGTE  E  
Sbjct: 280 LCTLVICCILAAVMFVYGMYQKKTAKLIQEITASANEVAQETYSLMRTVRVYGTEKQEFK 339

Query: 541 R 543
           R
Sbjct: 340 R 340



 Score = 50.4 bits (119), Expect(2) = 9e-80
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +2

Query: 584 ADISLRQSVAYGFWNLSFNTLYHSTQ 661
           ADISLRQS AYG WN SFNTLYH+TQ
Sbjct: 349 ADISLRQSAAYGIWNWSFNTLYHATQ 374


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