BLASTX nr result

ID: Coptis23_contig00022423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022423
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus c...    62   8e-08
ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252...    59   5e-07
ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802...    58   1e-06

>ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus communis]
           gi|223542345|gb|EEF43887.1| hypothetical protein
           RCOM_0905090 [Ricinus communis]
          Length = 632

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
 Frame = -3

Query: 374 ILSYPLAVYYVTMDLSSSSKIFCSITER***HYFGPEGDLNWILAVSEIGH*WVD*YAEN 195
           ILS+PL VYY+   L+ SSK      +    HY GPEG+L+W+ A +EI H  ++     
Sbjct: 442 ILSHPLTVYYILTTLNISSKNLLLKGKEVILHYLGPEGELDWMPAFAEISH-LLNGSGNI 500

Query: 194 H---VRTEVPTNM----SRVSSRIRVDLSRGV 120
           H   V  EVPTN+    S VSSR+RV+L RG+
Sbjct: 501 HIVMVGPEVPTNLSGTTSGVSSRVRVNLVRGI 532


>ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252085 [Vitis vinifera]
          Length = 633

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
 Frame = -3

Query: 374 ILSYPLAVYYVTMDLSSSSKIFCSITER***HYFGPEGDLNWILAVSEIGH--*WVD*YA 201
           ILS+ L VYY+   LS+SSK      +    HY GPEG+L+W+ A +E+GH    +    
Sbjct: 443 ILSHALTVYYILTTLSTSSKNLLLKGKEVILHYLGPEGELDWMPAFAEVGHLLNGLGNIQ 502

Query: 200 ENHVRTEVPTNM----SRVSSRIRVDLSRG 123
              V  EVPTN+    S +SSR+RV+L RG
Sbjct: 503 IVMVGPEVPTNLSGTTSGISSRVRVNLVRG 532


>ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802088 [Glycine max]
          Length = 631

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = -3

Query: 374 ILSYPLAVYYVTMDLSSSSKIFCSITER***HYFGPEGDLNWILAVSEIGH--*WVD*YA 201
           ILS+PL VY++   L+ SSK      +    HY GPEG+L+W+ A +E+GH    +    
Sbjct: 441 ILSHPLTVYHILTTLNISSKNLILKGKEVIVHYLGPEGELDWMPAFAEVGHLLNGLGNVQ 500

Query: 200 ENHVRTEVPTNM----SRVSSRIRVDLSRGV 120
              V  EVPTN+    S + SR+RV+L RGV
Sbjct: 501 IVMVGPEVPTNLSGTTSGIGSRVRVNLVRGV 531


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