BLASTX nr result

ID: Coptis23_contig00022419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022419
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
emb|CBI16910.3| unnamed protein product [Vitis vinifera]               79   1e-12
ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]        79   1e-12
emb|CAN71737.1| hypothetical protein VITISV_011557 [Vitis vinifera]    79   1e-12
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]       78   3e-12

>ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|222873708|gb|EEF10839.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
 Frame = -1

Query: 832 DEEGH----DGAGAQTRN-ENTKSRRVLGPEKPAFLSSNPDYEGWAPPKGQSGDGRTSLN 668
           DEEG+    + +G   R  E  + +RVLGPEKP+FL+SNPDYE W PP+GQSGDGRTSLN
Sbjct: 653 DEEGNHQSQEISGTNQRGKEKKRPKRVLGPEKPSFLNSNPDYETWVPPEGQSGDGRTSLN 712

Query: 667 ERFGY 653
           +RFGY
Sbjct: 713 DRFGY 717


>emb|CBI16910.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -1

Query: 832 DEEGHD----GAGAQTRNENTKSRRVLGPEKPAFLSSNPDYEGWAPPKGQSGDGRTSLNE 665
           DE  H+      G Q   +  K +RVLGPE+P+FL    DYE W PP+GQSGDGRTSLN+
Sbjct: 610 DENRHEKQDISGGNQPSKDKKKPKRVLGPERPSFLDGGSDYETWVPPEGQSGDGRTSLND 669

Query: 664 RFGY 653
           RFGY
Sbjct: 670 RFGY 673


>ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]
          Length = 753

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -1

Query: 832 DEEGHD----GAGAQTRNENTKSRRVLGPEKPAFLSSNPDYEGWAPPKGQSGDGRTSLNE 665
           DE  H+      G Q   +  K +RVLGPE+P+FL    DYE W PP+GQSGDGRTSLN+
Sbjct: 690 DENRHEKQDISGGNQPSKDKKKPKRVLGPERPSFLDGGSDYETWVPPEGQSGDGRTSLND 749

Query: 664 RFGY 653
           RFGY
Sbjct: 750 RFGY 753


>emb|CAN71737.1| hypothetical protein VITISV_011557 [Vitis vinifera]
          Length = 854

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -1

Query: 832 DEEGHD----GAGAQTRNENTKSRRVLGPEKPAFLSSNPDYEGWAPPKGQSGDGRTSLNE 665
           DE  H+      G Q   +  K +RVLGPE+P+FL    DYE W PP+GQSGDGRTSLN+
Sbjct: 791 DENRHEKQDISGGNQPSKDKKKPKRVLGPERPSFLDGGSDYETWVPPEGQSGDGRTSLND 850

Query: 664 RFGY 653
           RFGY
Sbjct: 851 RFGY 854


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
 Frame = -1

Query: 832  DEEGHDGAGAQTRNENTKS----RRVLGPEKPAFLSSNPDYEGWAPPKGQSGDGRTSLNE 665
            +E  H+   +  RN++ K     +RVLGPEKP+FL +  DYE W PP+GQSGDGRT+LNE
Sbjct: 899  EEVRHESKRSTGRNKSKKDEKKPKRVLGPEKPSFLDAKADYESWVPPEGQSGDGRTALNE 958

Query: 664  RFGY 653
            R+GY
Sbjct: 959  RYGY 962


Top