BLASTX nr result
ID: Coptis23_contig00022407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00022407
(434 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW70219.1| polyubiquitin-like protein [Zea mays] 119 2e-25
gb|AFW66438.1| putative ubiquitin family protein, partial [Zea m... 119 2e-25
dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 119 2e-25
ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]... 117 1e-24
gb|EGU84600.1| hypothetical protein FOXB_04788 [Fusarium oxyspor... 115 3e-24
>gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
Length = 502
Score = 119 bits (299), Expect = 2e-25
Identities = 78/153 (50%), Positives = 96/153 (62%), Gaps = 11/153 (7%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRTQRQGTEIDRRICGVRVDDITYSA-K 176
QLEDGRTLADYNIQKESTLHLVL L G I +T T +D++ K
Sbjct: 277 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQK 336
Query: 177 ESTI---------IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVD 329
EST+ +QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF
Sbjct: 337 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 396
Query: 330 KQLEDGRKLLEDGRTVAECNIQNGSTVYMVLNL 428
KQ LEDGRT+A+ NIQ ST+++VL L
Sbjct: 397 KQ-------LEDGRTLADYNIQKESTLHLVLRL 422
Score = 112 bits (280), Expect = 3e-23
Identities = 81/184 (44%), Positives = 103/184 (55%), Gaps = 42/184 (22%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRT------------------------Q 107
QLEDGRTLADYNIQKESTLHLVL L G I +T
Sbjct: 49 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 108
Query: 108 RQGTEIDRR---ICGVRVDDITYSA-----KESTI---------IQIFVRSIERKTTTLQ 236
++G D++ G +++D A KEST+ +QIFV+++ KT TL+
Sbjct: 109 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 168
Query: 237 VESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDGRTVAECNIQNGSTVYM 416
VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDGRT+A+ NIQ ST+++
Sbjct: 169 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDGRTLADYNIQKESTLHL 221
Query: 417 VLNL 428
VL L
Sbjct: 222 VLRL 225
Score = 112 bits (280), Expect = 3e-23
Identities = 81/184 (44%), Positives = 103/184 (55%), Gaps = 42/184 (22%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRT------------------------Q 107
QLEDGRTLADYNIQKESTLHLVL L G I +T
Sbjct: 125 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 184
Query: 108 RQGTEIDRR---ICGVRVDDITYSA-----KESTI---------IQIFVRSIERKTTTLQ 236
++G D++ G +++D A KEST+ +QIFV+++ KT TL+
Sbjct: 185 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 244
Query: 237 VESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDGRTVAECNIQNGSTVYM 416
VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDGRT+A+ NIQ ST+++
Sbjct: 245 VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDGRTLADYNIQKESTLHL 297
Query: 417 VLNL 428
VL L
Sbjct: 298 VLRL 301
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 398 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 425
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 426 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 476
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 477 DGRTLADYNIQKESTLHLVLRL 498
Score = 84.0 bits (206), Expect = 1e-14
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 189 IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDG 368
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDG 53
Query: 369 RTVAECNIQNGSTVYMVLNL 428
RT+A+ NIQ ST+++VL L
Sbjct: 54 RTLADYNIQKESTLHLVLRL 73
>gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea
mays]
Length = 349
Score = 119 bits (299), Expect = 2e-25
Identities = 78/153 (50%), Positives = 96/153 (62%), Gaps = 11/153 (7%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRTQRQGTEIDRRICGVRVDDITYSA-K 176
QLEDGRTLADYNIQKESTLHLVL L G I +T T +D++ K
Sbjct: 125 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQK 184
Query: 177 ESTI---------IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVD 329
EST+ +QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF
Sbjct: 185 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 244
Query: 330 KQLEDGRKLLEDGRTVAECNIQNGSTVYMVLNL 428
KQ LEDGRT+A+ NIQ ST+++VL L
Sbjct: 245 KQ-------LEDGRTLADYNIQKESTLHLVLRL 270
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 49 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 76
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 77 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 127
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 128 DGRTLADYNIQKESTLHLVLRL 149
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 246 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 273
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 274 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 324
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 325 DGRTLADYNIQKESTLHLVLRL 346
Score = 84.0 bits (206), Expect = 1e-14
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 189 IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDG 368
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDG 53
Query: 369 RTVAECNIQNGSTVYMVLNL 428
RT+A+ NIQ ST+++VL L
Sbjct: 54 RTLADYNIQKESTLHLVLRL 73
>dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
Length = 351
Score = 119 bits (299), Expect = 2e-25
Identities = 78/153 (50%), Positives = 96/153 (62%), Gaps = 11/153 (7%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRTQRQGTEIDRRICGVRVDDITYSA-K 176
QLEDGRTLADYNIQKESTLHLVL L G I +T T +D++ K
Sbjct: 125 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQK 184
Query: 177 ESTI---------IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVD 329
EST+ +QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF
Sbjct: 185 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 244
Query: 330 KQLEDGRKLLEDGRTVAECNIQNGSTVYMVLNL 428
KQ LEDGRT+A+ NIQ ST+++VL L
Sbjct: 245 KQ-------LEDGRTLADYNIQKESTLHLVLRL 270
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 49 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 76
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 77 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 127
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 128 DGRTLADYNIQKESTLHLVLRL 149
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 246 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 273
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 274 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 324
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 325 DGRTLADYNIQKESTLHLVLRL 346
Score = 84.0 bits (206), Expect = 1e-14
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 189 IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDG 368
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDG 53
Query: 369 RTVAECNIQNGSTVYMVLNL 428
RT+A+ NIQ ST+++VL L
Sbjct: 54 RTLADYNIQKESTLHLVLRL 73
>ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494716|gb|AES75919.1| Ubiquitin-like protein
[Medicago truncatula]
Length = 290
Score = 117 bits (293), Expect = 1e-24
Identities = 82/169 (48%), Positives = 102/169 (60%), Gaps = 27/169 (15%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRTQRQGT---EIDRR---------ICG 143
QLEDGRTLADYNIQKESTLHLVL L G I +T T E++R G
Sbjct: 125 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVERGYPPDQQRLIFAG 184
Query: 144 VRVDDITYSA-----KESTI---------IQIFVRSIERKTTTLQVESSDTIYEVKAKIE 281
+++D A KEST+ +QIFV+++ KT TL+VESSDTI VKAKI+
Sbjct: 185 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 244
Query: 282 TERGIPPSMQKLIFVDKQLEDGRKLLEDGRTVAECNIQNGSTVYMVLNL 428
+ GIPP Q+LIF KQ LEDGRT+A+ NIQ ST+++VL L
Sbjct: 245 DKEGIPPDQQRLIFAGKQ-------LEDGRTLADYNIQKESTLHLVLRL 286
Score = 111 bits (278), Expect = 5e-23
Identities = 71/142 (50%), Positives = 84/142 (59%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNLGQDSILDRTQRQGTEIDRRICGVRVDDITYSAKES 182
QLEDGRTLADYNIQKESTLHLVL L R G
Sbjct: 49 QLEDGRTLADYNIQKESTLHLVLRL----------RGG---------------------- 76
Query: 183 TIIQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLE 362
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LE
Sbjct: 77 --MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LE 127
Query: 363 DGRTVAECNIQNGSTVYMVLNL 428
DGRT+A+ NIQ ST+++VL L
Sbjct: 128 DGRTLADYNIQKESTLHLVLRL 149
Score = 84.0 bits (206), Expect = 1e-14
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 189 IQIFVRSIERKTTTLQVESSDTIYEVKAKIETERGIPPSMQKLIFVDKQLEDGRKLLEDG 368
+QIFV+++ KT TL+VESSDTI VKAKI+ + GIPP Q+LIF KQ LEDG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ-------LEDG 53
Query: 369 RTVAECNIQNGSTVYMVLNL 428
RT+A+ NIQ ST+++VL L
Sbjct: 54 RTLADYNIQKESTLHLVLRL 73
>gb|EGU84600.1| hypothetical protein FOXB_04788 [Fusarium oxysporum Fo5176]
Length = 890
Score = 115 bits (289), Expect = 3e-24
Identities = 81/168 (48%), Positives = 103/168 (61%), Gaps = 26/168 (15%)
Frame = +3
Query: 3 QLEDGRTLADYNIQKESTLHLVLNL-GQDSILDRTQRQGT---------EIDRRI--CGV 146
QLEDGRTLADYNIQKESTLHLVL L G I +T T ID R+ G
Sbjct: 18 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNRLIFAGK 77
Query: 147 RVDD----ITYSA-KESTI---------IQIFVRSIERKTTTLQVESSDTIYEVKAKIET 284
+++D Y+ KEST+ +QIFV+++ KT TL+VESSDTI VK+KI+
Sbjct: 78 QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 137
Query: 285 ERGIPPSMQKLIFVDKQLEDGRKLLEDGRTVAECNIQNGSTVYMVLNL 428
+ GIPP Q+LIF KQ LEDGRT+++ NIQ ST+++VL L
Sbjct: 138 KEGIPPDQQRLIFAGKQ-------LEDGRTLSDYNIQKESTLHLVLRL 178