BLASTX nr result

ID: Coptis23_contig00022406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022406
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]   120   2e-25
ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798...   100   3e-19
emb|CBI28534.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|2...    95   1e-17
gb|AFK48311.1| unknown [Lotus japonicus]                               93   5e-17

>emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]
          Length = 119

 Score =  120 bits (302), Expect = 2e-25
 Identities = 63/115 (54%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
 Frame = -3

Query: 531 MSLP---PPVIYPNTVTTQPTSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 361
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 360 PKRDHQNSRPKDGDLEFGFKQGIPMAKPIGHGEIRE--PRPVYNGELKGDTRFAE 202
             + +   RPK+ DLEFGF +G P AKP G+G  +    RP  NGE++ + +  E
Sbjct: 61  NPKQNSAFRPKEPDLEFGFDKGRPTAKPAGNGGPKHNGHRPFENGEIRAENKPTE 115


>ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798784 [Glycine max]
          Length = 149

 Score =  100 bits (249), Expect = 3e-19
 Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
 Frame = -3

Query: 519 PPVIYPNTVTTQ-PTSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHS------K 361
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR  HS      K
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGGHSHNQKHVK 80

Query: 360 PKR------DHQNSRPKDGDLEFGFKQGIPMAKPIGHGEIREPRPV-YNGELKG-DTRFA 205
           P++      +H N RPK+ D+EFGF + I  +KP GHG  R  +P+ ++G++K  + +  
Sbjct: 81  PQKKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNGHGAGRGIKPLPHHGDVKTFEMKLG 140

Query: 204 EHGDAKP 184
             G  +P
Sbjct: 141 HQGKIRP 147


>emb|CBI28534.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
 Frame = -3

Query: 531 MSLP---PPVIYPNTVTTQPTSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 361
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 360 PKRDHQNSRPKDGDLEFGFKQGIP 289
             + +   RPK+ DLEF   Q  P
Sbjct: 61  NPKQNSAFRPKEPDLEFVIFQNYP 84


>ref|XP_002314615.1| predicted protein [Populus trichocarpa] gi|222863655|gb|EEF00786.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 18/127 (14%)
 Frame = -3

Query: 519 PPVIYPNTVTTQ-PTSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSKPKRDHQ 343
           P V+YPNTV  Q P+SHS GSFG VFI+LAVI+V+SA ACCLG++C +RL+  K   + Q
Sbjct: 13  PVVLYPNTVARQAPSSHSNGSFGTVFIVLAVIVVISAIACCLGRICNKRLNKQKVNNNKQ 72

Query: 342 N---------SRPK--DGDLEFGFKQGIPMAK--PIGHGEIREPRPVYNGELKG----DT 214
           +          RPK  + DLEFGF +G P A+   +   + R  +P  NG   G    +T
Sbjct: 73  SLQHSQHTPTFRPKERESDLEFGFDKGFPTARNSNMKGSDPRGHKPFGNGHFSGRGETNT 132

Query: 213 RFAEHGD 193
              +HG+
Sbjct: 133 SAGDHGE 139


>gb|AFK48311.1| unknown [Lotus japonicus]
          Length = 171

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 50/106 (47%), Positives = 72/106 (67%), Gaps = 7/106 (6%)
 Frame = -3

Query: 519 PPVIYPNTVTTQ-PTSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARR---LSHSKPKR 352
           P  +YP +VT Q P  HS GSFG VF++LA+IIV+SA AC LG+LC+RR     H+K ++
Sbjct: 18  PVQVYPTSVTYQSPPHHSNGSFGSVFVVLAIIIVISAVACFLGRLCSRRGGGGKHAKQQK 77

Query: 351 --DHQNSRPKDGDLEFGFKQGIPMAKPI-GHGEIREPRPVYNGELK 223
             +  N RPK+ D+EFGF + I  +KPI GHG  R  +P+ + +++
Sbjct: 78  QPNQHNMRPKEVDIEFGFDKKIAASKPINGHGSGRVHKPISHADMQ 123


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