BLASTX nr result

ID: Coptis23_contig00022405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022405
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518013.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   241   6e-62
emb|CBI27076.3| unnamed protein product [Vitis vinifera]              237   1e-60
ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090...   235   6e-60
ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...   234   1e-59
ref|XP_003614410.1| hypothetical protein MTR_5g053280 [Medicago ...   233   2e-59

>ref|XP_003518013.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At1g26090,
           chloroplastic-like [Glycine max]
          Length = 394

 Score =  241 bits (616), Expect = 6e-62
 Identities = 125/216 (57%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
 Frame = -2

Query: 636 IIIYDGISNEETLRMIGMTERARWYLKYLRNIAEKTDVGRLTAPSLLRLVDEVXXXXXXX 457
           +IIYDGIS+EETLR+IG + +AR YLKYL  +AE+T++GRLTAPSLLRLVDE        
Sbjct: 132 VIIYDGISSEETLRIIGGSSKARLYLKYLHTLAERTELGRLTAPSLLRLVDEAVLRSGSR 191

Query: 456 XXXXXGKMSGEIWDDIDRILERASGSFLEPSKFGCYLMIDPNSPTSVKSALRYWGCAIQS 277
                 KMS EIWD +D++LER S +F  P KFGC+L++DPN+PTS+ SALRYWGC IQ+
Sbjct: 192 SYFNG-KMSSEIWDALDQMLERGSSAFSNPQKFGCFLVMDPNNPTSINSALRYWGCTIQA 250

Query: 276 GAQVSGAFGLTTKQSCAESAEMIHKSFSPLPSAFMPYLSTNSPIDFDAVV---FREDLQH 106
           GAQVSGAFG+T++Q   ES E   K FSPLPSAF+  LS N+PID+  ++     ED +H
Sbjct: 251 GAQVSGAFGITSQQENLESFERAKKEFSPLPSAFVSRLSMNNPIDWSILLQDTSNEDARH 310

Query: 105 LLSTASS-SGKVQSSVEFNHTKKSVTLFMPGFDKSE 1
           LL++ SS  G + S+V F+  +KS TLFMPGFD SE
Sbjct: 311 LLNSVSSQGGDMPSAVRFDIKRKSATLFMPGFDXSE 346


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  237 bits (605), Expect = 1e-60
 Identities = 128/216 (59%), Positives = 157/216 (72%), Gaps = 4/216 (1%)
 Frame = -2

Query: 636 IIIYDGISNEETLRMIGMTERARWYLKYLRNIAEKTDVGRLTAPSLLRLVDEVXXXXXXX 457
           IIIYDGI+ EETLRMIG+T RAR YLKYLRN+AE+TD+GRL  PSLLRLVDE        
Sbjct: 180 IIIYDGINTEETLRMIGVTSRARLYLKYLRNMAERTDIGRLAGPSLLRLVDEAMSLSTRG 239

Query: 456 XXXXXGKMSGEIWDDIDRILERASGSFLEPSKFGCYLMIDPNSPTSVKSALRYWGCAIQS 277
                 KMS EIWD ++R LER S +F EP +FGCYL++DPN+P SV SALRYWGCAIQ+
Sbjct: 240 SNLNG-KMSSEIWDILERALERGSSAFGEPREFGCYLVVDPNNPASVSSALRYWGCAIQA 298

Query: 276 GAQVSGAFGLTTKQSCAESAEMIHKSFSPLPSAFMPYLSTNSPIDFDAVVF---REDLQH 106
           GAQVSGAFG  +  S  ES E++ K+FSPLP A  P++   S  D++A++     ED ++
Sbjct: 299 GAQVSGAFGTASPHSDVESEEIV-KNFSPLPFALCPHVPMGSLPDWNAIISSNPSEDARN 357

Query: 105 LLST-ASSSGKVQSSVEFNHTKKSVTLFMPGFDKSE 1
           LLS  ASSS  V   V+F+ +KKSV+L MPGFDKSE
Sbjct: 358 LLSAPASSSSNVMEPVKFDPSKKSVSLLMPGFDKSE 393


>ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Glycine max]
          Length = 442

 Score =  235 bits (599), Expect = 6e-60
 Identities = 124/216 (57%), Positives = 155/216 (71%), Gaps = 4/216 (1%)
 Frame = -2

Query: 636 IIIYDGISNEETLRMIGMTERARWYLKYLRNIAEKTDVGRLTAPSLLRLVDEVXXXXXXX 457
           +IIYDGIS+EETLR+IG + +AR YLKYLR +AEKT++GRL APSLLRLVDE        
Sbjct: 180 LIIYDGISSEETLRIIGASSKARLYLKYLRTLAEKTELGRLAAPSLLRLVDEAMLISSSR 239

Query: 456 XXXXXGKMSGEIWDDIDRILERASGSFLEPSKFGCYLMIDPNSPTSVKSALRYWGCAIQS 277
                 KMS EIWD +D++LER S +F  P KFGC+L++DPN+PTS+ SALRYWGC IQ+
Sbjct: 240 SYFNG-KMSSEIWDTLDQMLERGSSAFSNPKKFGCFLVMDPNNPTSINSALRYWGCTIQT 298

Query: 276 GAQVSGAFGLTTKQSCAESAEMIHKSFSPLPSAFMPYLSTNSPIDFDAVVF---REDLQH 106
           GA+VSGAFG+T++    ES E   K FSPLPSA +  LS N+ ID+  V+     ED +H
Sbjct: 299 GARVSGAFGITSQLENLESLERAKKEFSPLPSASISRLSMNNSIDWSRVLLDTGNEDARH 358

Query: 105 LLSTASS-SGKVQSSVEFNHTKKSVTLFMPGFDKSE 1
           LL++ SS  G + S V F+   K VTLFMPGFDKSE
Sbjct: 359 LLNSLSSQGGDMPSPVRFDKKGKLVTLFMPGFDKSE 394


>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score =  234 bits (597), Expect = 1e-59
 Identities = 127/216 (58%), Positives = 156/216 (72%), Gaps = 4/216 (1%)
 Frame = -2

Query: 636 IIIYDGISNEETLRMIGMTERARWYLKYLRNIAEKTDVGRLTAPSLLRLVDEVXXXXXXX 457
           IIIYDGI+ EETLRMIG+T RAR YLKYLRN+AE+TD+GRL  PSLLRLVDE        
Sbjct: 180 IIIYDGINTEETLRMIGVTSRARLYLKYLRNMAERTDIGRLAGPSLLRLVDEAMSLSTRG 239

Query: 456 XXXXXGKMSGEIWDDIDRILERASGSFLEPSKFGCYLMIDPNSPTSVKSALRYWGCAIQS 277
                 KMS EIWD ++R LE  S +F EP +FGCYL++DPN+P SV SALRYWGCAIQ+
Sbjct: 240 SNLNG-KMSSEIWDILERALEVGSSAFGEPREFGCYLVVDPNNPASVSSALRYWGCAIQA 298

Query: 276 GAQVSGAFGLTTKQSCAESAEMIHKSFSPLPSAFMPYLSTNSPIDFDAVVF---REDLQH 106
           GAQVSGAFG  +  S  ES E++ K+FSPLP A  P++   S  D++A++     ED ++
Sbjct: 299 GAQVSGAFGTASPHSDVESEEIV-KNFSPLPFALCPHVPMGSLPDWNAIISSNPSEDARN 357

Query: 105 LLST-ASSSGKVQSSVEFNHTKKSVTLFMPGFDKSE 1
           LLS  ASSS  V   V+F+ +KKSV+L MPGFDKSE
Sbjct: 358 LLSAPASSSSNVMEPVKFDPSKKSVSLLMPGFDKSE 393


>ref|XP_003614410.1| hypothetical protein MTR_5g053280 [Medicago truncatula]
           gi|355515745|gb|AES97368.1| hypothetical protein
           MTR_5g053280 [Medicago truncatula]
          Length = 440

 Score =  233 bits (594), Expect = 2e-59
 Identities = 121/216 (56%), Positives = 156/216 (72%), Gaps = 4/216 (1%)
 Frame = -2

Query: 636 IIIYDGISNEETLRMIGMTERARWYLKYLRNIAEKTDVGRLTAPSLLRLVDEVXXXXXXX 457
           +IIYDG+S+EETLR++G + +AR YLKY+R +AEKT++GRL APSLLRLVDE        
Sbjct: 178 VIIYDGVSSEETLRIMGGSSKARLYLKYIRTLAEKTEIGRLAAPSLLRLVDEAMKINSSR 237

Query: 456 XXXXXGKMSGEIWDDIDRILERASGSFLEPSKFGCYLMIDPNSPTSVKSALRYWGCAIQS 277
                 +MS E WD +D++LE+ S +F  P KFGC L++DPN+PTSV SA RYWGCAIQ+
Sbjct: 238 SYFNG-RMSSETWDTLDQLLEKGSSAFSNPQKFGCLLVMDPNNPTSVNSASRYWGCAIQA 296

Query: 276 GAQVSGAFGLTTKQSCAESAEMIHKSFSPLPSAFMPYLSTNSPIDFDAV----VFREDLQ 109
           GAQVSGAFG++++Q  AES E   K  SPLPSAF+     NSPID++ V    V ++  Q
Sbjct: 297 GAQVSGAFGISSQQPKAESFERAKKDLSPLPSAFISSPLVNSPIDWNKVLLDTVNKDARQ 356

Query: 108 HLLSTASSSGKVQSSVEFNHTKKSVTLFMPGFDKSE 1
            L S +S S  + SSV+F+  +KSVTLFMPGFDKSE
Sbjct: 357 FLTSLSSQSSNMTSSVKFDVIRKSVTLFMPGFDKSE 392


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