BLASTX nr result

ID: Coptis23_contig00022384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022384
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526473.1| cyclin-dependent protein kinase, putative [R...   195   3e-48
ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycin...   191   7e-47
ref|XP_003534482.1| PREDICTED: cyclin-U4-1-like [Glycine max]         190   9e-47
gb|AFK41945.1| unknown [Lotus japonicus]                              190   1e-46

>ref|XP_002526473.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223534148|gb|EEF35864.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score =  195 bits (496), Expect = 3e-48
 Identities = 93/109 (85%), Positives = 101/109 (92%)
 Frame = +1

Query: 1   EKVAEANDNNRDLQQQKISVFHGLTRPTISVQSYLERIFKYANCSPSCFVVAYVYLDRFA 180
           ++VAE+ND N  +  QKISVFHGLTRPTIS+Q+YLERIFKYANCSPSCF+VAYVYLDRFA
Sbjct: 22  QRVAESNDLNLQIHTQKISVFHGLTRPTISIQNYLERIFKYANCSPSCFIVAYVYLDRFA 81

Query: 181 QRQPCLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISITEM 327
           QRQP LP+NSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGIS  EM
Sbjct: 82  QRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISTIEM 130


>ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|222835340|gb|EEE73775.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  195 bits (496), Expect = 3e-48
 Identities = 93/109 (85%), Positives = 102/109 (93%)
 Frame = +1

Query: 1   EKVAEANDNNRDLQQQKISVFHGLTRPTISVQSYLERIFKYANCSPSCFVVAYVYLDRFA 180
           ++VA++ND NR+ Q QKISVFHGLTRPTIS+QSYLERIFKYANCSPSCFVVAYVYLDRFA
Sbjct: 22  QRVADSNDLNREFQPQKISVFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFA 81

Query: 181 QRQPCLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISITEM 327
           QRQP LPINS NVHRLLITSV+V+AKFMDDMYYNNAYYA+VGGIS  EM
Sbjct: 82  QRQPSLPINSLNVHRLLITSVLVSAKFMDDMYYNNAYYARVGGISTIEM 130


>ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycine max]
           gi|255626323|gb|ACU13506.1| unknown [Glycine max]
          Length = 209

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/110 (85%), Positives = 101/110 (91%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   EKVAEANDNNRDLQQ-QKISVFHGLTRPTISVQSYLERIFKYANCSPSCFVVAYVYLDRF 177
           E+VAE+ND+N  LQQ QKISVFHGLTRP IS+Q YLERIFKYANCSPSCFVVAYVYLDRF
Sbjct: 24  ERVAESNDHNHHLQQHQKISVFHGLTRPNISIQCYLERIFKYANCSPSCFVVAYVYLDRF 83

Query: 178 AQRQPCLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISITEM 327
            QRQP LPINSFNVHRLLITSVMVAAKFMDDM+YNNA+YAKVGGI+  EM
Sbjct: 84  TQRQPSLPINSFNVHRLLITSVMVAAKFMDDMFYNNAHYAKVGGITKVEM 133


>ref|XP_003534482.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 188

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/110 (83%), Positives = 101/110 (91%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   EKVAEAND-NNRDLQQQKISVFHGLTRPTISVQSYLERIFKYANCSPSCFVVAYVYLDRF 177
           ++VAE+ND N + L  QK+SVFHGLTRPTIS+QSYLERIFKYANCSPSCF+VAYVYLDRF
Sbjct: 22  KRVAESNDLNQQQLIHQKVSVFHGLTRPTISIQSYLERIFKYANCSPSCFIVAYVYLDRF 81

Query: 178 AQRQPCLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISITEM 327
            QRQP LPINSFNVHRLLITSVMVAAKFMDD+YYNNAYYAKVGGI+  EM
Sbjct: 82  TQRQPSLPINSFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGGITTIEM 131


>gb|AFK41945.1| unknown [Lotus japonicus]
          Length = 207

 Score =  190 bits (482), Expect = 1e-46
 Identities = 93/111 (83%), Positives = 101/111 (90%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1   EKVAEANDNNRDLQ--QQKISVFHGLTRPTISVQSYLERIFKYANCSPSCFVVAYVYLDR 174
           +KVAE+ND N+  Q   QKISVFHGLTRPTIS+QSYLERIFKYANCSPSCF+VAYVYLDR
Sbjct: 22  KKVAESNDLNQQQQLIHQKISVFHGLTRPTISIQSYLERIFKYANCSPSCFIVAYVYLDR 81

Query: 175 FAQRQPCLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISITEM 327
           F Q+QP LPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYA+VGGI+  EM
Sbjct: 82  FTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYARVGGITTIEM 132


Top