BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022376
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    83   5e-14
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    83   7e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    83   7e-14
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    80   5e-13

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/105 (36%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   KTVGFKVYKLNFGSLNKWVEIQSLGDRALFLG*NSSFSIMSSHFLGWKRNCIYFTDDFWS 181
           +T+ F +++++F     WV + SL D+A+F+G N S S+++    G ++N +YFTDD+W 
Sbjct: 358 RTLLFGLFRMDFDK-ETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWE 416

Query: 182 YFREQG-FGAQDMDIYNLEDGTINKFLYPSETFLVMPPPIWFIPN 313
              E   +G  DM ++NL+D ++  F Y  +   + PPP WF+PN
Sbjct: 417 RMNEDYLYGGHDMGVFNLKDKSVKHF-YQLDALKIQPPPCWFLPN 460


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = +2

Query: 2   KTVGFKVYKLNFGSLNKWVEIQSLGDRALFLG*NSSFSIMSSHFLGWKRNCIYFTDDFWS 181
           +TVGF+V+K+N+G L  W  +++LG+R LF+G NSS S  +S F+G   +CIYFTDD+  
Sbjct: 286 RTVGFEVFKMNWGLLT-WQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344

Query: 182 YFREQGFGAQDMDIYNLEDGTINK---FLYPSETFLVMPPPIWFIPN 313
              +   G  D+ ++ L D +I     F   S + L  P PIW  PN
Sbjct: 345 SNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPN 391


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   KTVGFKVYKLNFGSLNKWVEIQSLGDRALFLG*NSSFSIMSSHFLGWKRNCIYFTDDFWS 181
           +T  F+V +L+  +  +W  + SLGDRALFLG N S S+ S  F G K NCIY+TDD+  
Sbjct: 286 RTTRFQVCRLDLKA-PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 182 YFREQGFGAQDMDIYNLEDGTINKFLYPSETFLV-MPPPIWFIPN 313
              +   G QD+ I+NLEDG+I     P   F +  PPP+W  PN
Sbjct: 345 DNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   KTVGFKVYKLNFGSLNKWVEIQSLGDRALFLG*NSSFSIMSSHFLGWKRNCIYFTDDFWS 181
           +T  F+V +L+     +W  + SLGDRALFLG N S S+ S  F G K NCIY+TDD+  
Sbjct: 286 RTTRFQVCRLD-SKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 182 YFREQGFGAQDMDIYNLEDGTINKFLYPSETFLV-MPPPIWFIPN 313
              +   G QD+ I+NLEDG+I     P   F +  PPP+W  PN
Sbjct: 345 DNYDGIGGEQDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVTPN 387


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
 Frame = +2

Query: 2   KTVGFKVYKLNFGSLNKWVEIQSLGDRALFLG*NSSFSIMSSHFLGWKRNCIYFTDDFWS 181
           +TV FKV+KLN      W+E+++L DR LFLG +S+FS  +S   G K NCI+F D+F+ 
Sbjct: 287 RTVRFKVFKLNEEG-KSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFF- 344

Query: 182 YFREQG----FGAQDMDIYNLEDGTINKFL-YPSETFLVMPPPIWFIPNTSSVVHNKQSK 346
           Y RE+G       +D+ ++ LE G I     +P  + +  PPP W I +TS  V N+   
Sbjct: 345 YSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDW-IASTSLEVQNQNQL 403

Query: 347 RKRAIKE 367
            +  I++
Sbjct: 404 EELLIEK 410