BLASTX nr result

ID: Coptis23_contig00022374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022374
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237780.1| uncharacterized protein LOC100527299 [Glycin...   114   1e-23
gb|AFK37888.1| unknown [Medicago truncatula]                          113   2e-23
ref|XP_003544636.1| PREDICTED: uncharacterized protein LOC100789...   113   2e-23
ref|XP_002872131.1| hypothetical protein ARALYDRAFT_910533 [Arab...   112   4e-23
ref|NP_197868.1| flowering promoting factor 1 [Arabidopsis thali...   111   5e-23

>ref|NP_001237780.1| uncharacterized protein LOC100527299 [Glycine max]
           gi|255632035|gb|ACU16370.1| unknown [Glycine max]
           gi|255634258|gb|ACU17493.1| unknown [Glycine max]
          Length = 114

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/88 (70%), Positives = 65/88 (73%), Gaps = 13/88 (14%)
 Frame = +1

Query: 73  MSGVWVFKNGVIRLVENPPA------------GSEKVLVYEPTGEVISSYATLERILTGL 216
           MSGVWVFKNGV RLVENP A               KVLV+ PTGEV+SSYA LE+ILTGL
Sbjct: 1   MSGVWVFKNGVFRLVENPQAEASDGRHGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGL 60

Query: 217 GWERYYD-DYDLLQFHKSSSIDLISLPK 297
           GWERYYD D DL QFHK SSIDLISLPK
Sbjct: 61  GWERYYDGDPDLYQFHKHSSIDLISLPK 88


>gb|AFK37888.1| unknown [Medicago truncatula]
          Length = 109

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/82 (73%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
 Frame = +1

Query: 73  MSGVWVFKNGVIRLVENPPAGSE------KVLVYEPTGEVISSYATLERILTGLGWERYY 234
           MSGVWVFKNGV RLVENP A SE      K+LV+ PTGEV++SY  LERIL GLGWERYY
Sbjct: 1   MSGVWVFKNGVFRLVENPQAESEVRHGKRKMLVHLPTGEVVTSYVFLERILIGLGWERYY 60

Query: 235 D-DYDLLQFHKSSSIDLISLPK 297
           D D DL QFHK  SIDLISLPK
Sbjct: 61  DGDVDLYQFHKHCSIDLISLPK 82


>ref|XP_003544636.1| PREDICTED: uncharacterized protein LOC100789226 [Glycine max]
          Length = 113

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/87 (70%), Positives = 65/87 (74%), Gaps = 12/87 (13%)
 Frame = +1

Query: 73  MSGVWVFKNGVIRLVENPPA-----------GSEKVLVYEPTGEVISSYATLERILTGLG 219
           MSGVWVFKNGV RLVENP A              K+LV+ PTGEV+SSYA LE+ILTGLG
Sbjct: 1   MSGVWVFKNGVFRLVENPQAEVSDRHGKGSSSKRKMLVHLPTGEVVSSYAFLEQILTGLG 60

Query: 220 WERYYD-DYDLLQFHKSSSIDLISLPK 297
           WERYYD D DL QFHK SSIDLISLPK
Sbjct: 61  WERYYDGDPDLYQFHKHSSIDLISLPK 87


>ref|XP_002872131.1| hypothetical protein ARALYDRAFT_910533 [Arabidopsis lyrata subsp.
           lyrata] gi|297317968|gb|EFH48390.1| hypothetical protein
           ARALYDRAFT_910533 [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 7/82 (8%)
 Frame = +1

Query: 73  MSGVWVFKNGVIRLVENP-PAGSE-----KVLVYEPTGEVISSYATLERILTGLGWERYY 234
           MSGVWVFKNGVIRLVENP  +GS+     KV+VY PTGEV+SSY+TLE+IL  LGWERY+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDTHSRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYF 60

Query: 235 -DDYDLLQFHKSSSIDLISLPK 297
             D DLLQFHK SSIDLISLP+
Sbjct: 61  GGDTDLLQFHKRSSIDLISLPR 82


>ref|NP_197868.1| flowering promoting factor 1 [Arabidopsis thaliana]
           gi|75097934|sp|O23624.1|FPF1_ARATH RecName:
           Full=Flowering-promoting factor 1; Short=AtFPF1
           gi|2369690|emb|CAA72717.1| FPF1 protein [Arabidopsis
           thaliana] gi|90962956|gb|ABE02402.1| At5g24860
           [Arabidopsis thaliana] gi|332005987|gb|AED93370.1|
           flowering promoting factor 1 [Arabidopsis thaliana]
          Length = 110

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/83 (72%), Positives = 68/83 (81%), Gaps = 8/83 (9%)
 Frame = +1

Query: 73  MSGVWVFKNGVIRLVENP-PAGSE-----KVLVYEPTGEVISSYATLERILTGLGWERYY 234
           MSGVWVFKNGVIRLVENP  +GS+     KV+VY PTGEV+SSY+TLE+IL  LGWERY+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYF 60

Query: 235 --DDYDLLQFHKSSSIDLISLPK 297
              D DLLQFHK SSIDLISLP+
Sbjct: 61  GGGDTDLLQFHKRSSIDLISLPR 83


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