BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022373
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19618.3| unnamed protein product [Vitis vinifera]              188   7e-46
ref|XP_002514151.1| pentatricopeptide repeat-containing protein,...   154   1e-35
ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   154   2e-35
ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containi...   154   2e-35
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]   149   6e-34

>emb|CBI19618.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  188 bits (478), Expect = 7e-46
 Identities = 95/201 (47%), Positives = 138/201 (68%), Gaps = 1/201 (0%)
 Frame = +2

Query: 71  KKIPVAVSRVSQQEIPHMREKVRISSDLDSFCREGRVQEALELMEDIEKQGLVVDPNAII 250
           KK  V VSRVSQ+E+ +++E+     DL   CR+G V+ AL +++++E+ G+ V    + 
Sbjct: 197 KKYLVVVSRVSQREVVNVQEE-----DLKRLCRQGNVEAALHVIDEMERNGVTVSALGLA 251

Query: 251 SLLQACINLKLLESGRRVHNYMMR-SSSRGINKFNKLVEMYCKLGSTKDALGVFEEMSWK 427
            LLQ CI+LKLLE G+R H  +MR SS+  +  FNKL+EMY  LG T+ A  VFEEM  +
Sbjct: 252 ELLQVCIDLKLLEVGKRAHELVMRLSSNPSVIVFNKLLEMYFDLGDTRSACRVFEEMRGR 311

Query: 428 NLNSWNKILAGLAENEQGKVVLEMFTEMNRSGVRPDQFTFSAVLMACGSLGAVEEGISYF 607
            L+SWN+++ GL +N +G+  L +F+++ + G+ PD  TF  VL AC  LGAVEEG+++F
Sbjct: 312 TLDSWNRMILGLVKNGEGEEALAIFSKLKKDGIEPDGSTFIGVLSACECLGAVEEGLAHF 371

Query: 608 ESMGKDFGISPSMEHYISIVD 670
            SM  D+GI+PSMEH+  IVD
Sbjct: 372 NSMSTDYGITPSMEHFAIIVD 392


>ref|XP_002514151.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546607|gb|EEF48105.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 388

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/175 (44%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
 Frame = +2

Query: 149 DLDSFCREGRVQEALELMEDIEKQGLVVDPNAIISLLQACINLKLLESGRRVHNYMMRSS 328
           DL S C EG+V+EALE M     QG   D +   +LL  C +LKLL+ G+RVH ++ RS+
Sbjct: 93  DLMSLCDEGKVEEALECMG----QGASADCSVFGALLDCCGSLKLLDMGKRVHEFLRRST 148

Query: 329 -SRGINKFNKLVEMYCKLGSTKDALGVFEEMSWKNLNSWNKILAGLAENEQGKVVLEMFT 505
            +  I   NKL+EMY   GS +DA  VF++M  +N+ SW+ +++G A N QG   L +F 
Sbjct: 149 FADDIEMNNKLIEMYGNCGSVRDARRVFDKMRERNMRSWHLLISGYAANGQGDDGLLLFE 208

Query: 506 EMNRSGVRPDQFTFSAVLMACGSLGAVEEGISYFESMGKDFGISPSMEHYISIVD 670
           EM  SG+RPD+ TFS V  AC S GA++EG+ +FE++  ++G+SP ++HY+ ++D
Sbjct: 209 EMKESGLRPDENTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYLGVID 263


>ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g25580-like [Cucumis sativus]
          Length = 731

 Score =  154 bits (388), Expect = 2e-35
 Identities = 72/174 (41%), Positives = 118/174 (67%), Gaps = 1/174 (0%)
 Frame = +2

Query: 152 LDSFCREGRVQEALELMEDIEKQGLVVDPNAIISLLQACINLKLLESGRRVHNYMMRSSS 331
           LD FC+EG+++EA++++E +EKQ + VD +  + L+ AC   + LE  + V NY+++S +
Sbjct: 340 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 399

Query: 332 R-GINKFNKLVEMYCKLGSTKDALGVFEEMSWKNLNSWNKILAGLAENEQGKVVLEMFTE 508
              ++ +NK++EMY K GS  DA  +F +M  +N+ SW+ ++  LA+N  G+  +++F E
Sbjct: 400 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 459

Query: 509 MNRSGVRPDQFTFSAVLMACGSLGAVEEGISYFESMGKDFGISPSMEHYISIVD 670
             ++G+RPD   F  V  AC  LG  +EG+ +FESM K++GI+PSM HY+SIVD
Sbjct: 460 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVD 513


>ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g25580-like [Cucumis sativus]
          Length = 671

 Score =  154 bits (388), Expect = 2e-35
 Identities = 72/174 (41%), Positives = 118/174 (67%), Gaps = 1/174 (0%)
 Frame = +2

Query: 152 LDSFCREGRVQEALELMEDIEKQGLVVDPNAIISLLQACINLKLLESGRRVHNYMMRSSS 331
           LD FC+EG+++EA++++E +EKQ + VD +  + L+ AC   + LE  + V NY+++S +
Sbjct: 280 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 339

Query: 332 R-GINKFNKLVEMYCKLGSTKDALGVFEEMSWKNLNSWNKILAGLAENEQGKVVLEMFTE 508
              ++ +NK++EMY K GS  DA  +F +M  +N+ SW+ ++  LA+N  G+  +++F E
Sbjct: 340 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 399

Query: 509 MNRSGVRPDQFTFSAVLMACGSLGAVEEGISYFESMGKDFGISPSMEHYISIVD 670
             ++G+RPD   F  V  AC  LG  +EG+ +FESM K++GI+PSM HY+SIVD
Sbjct: 400 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVD 453


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score =  149 bits (375), Expect = 6e-34
 Identities = 71/175 (40%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
 Frame = +2

Query: 149 DLDSFCREGRVQEALELMEDIEKQGLVVDPNAIISLLQACINLKLLESGRRVHNYMMRS- 325
           ++D FC++G+V+EA+E++  +EKQ   VD    + L++AC   K L+  + VH  +++S 
Sbjct: 415 EVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSV 474

Query: 326 SSRGINKFNKLVEMYCKLGSTKDALGVFEEMSWKNLNSWNKILAGLAENEQGKVVLEMFT 505
           S   ++ +N+++EMY K GS  DA  VF++M  +NL SW+ ++   A+N+ G+  +++F 
Sbjct: 475 SPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLFI 534

Query: 506 EMNRSGVRPDQFTFSAVLMACGSLGAVEEGISYFESMGKDFGISPSMEHYISIVD 670
           +   SG++PD   F  V MAC  LG V EG+ +F SM KD+GI PSM+HY S+VD
Sbjct: 535 QFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVD 589