BLASTX nr result

ID: Coptis23_contig00022363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022363
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]         369   e-100
ref|XP_002304454.1| predicted protein [Populus trichocarpa] gi|2...   368   2e-99
gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249...   365   9e-99
ref|NP_001234723.1| senescence-inducible chloroplast stay-green ...   361   2e-97
ref|XP_002298080.1| predicted protein [Populus trichocarpa] gi|2...   355   2e-95

>gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]
          Length = 267

 Score =  369 bits (948), Expect = e-100
 Identities = 179/248 (72%), Positives = 206/248 (83%), Gaps = 1/248 (0%)
 Frame = -1

Query: 1036 SATFLLPTQLRPSYLNRRTSLFIYKSRPKK-KNHSIVPVARLFGPAIFEASKLKVLFLGV 860
            + +  +P++L P    +++S+FIYK+R K  KN SIVPVARLFGPAIFEASKLKVLFLGV
Sbjct: 5    TTSLAVPSKLNPE---KQSSIFIYKTRRKSNKNQSIVPVARLFGPAIFEASKLKVLFLGV 61

Query: 859  DGKKHPGNLPRTYTLTHSDITAKLTLAISQTINGSQLQGWYNRLYRDEVVAEWKKVKGKM 680
            D KKHPG  PRTYTLTHSD+T+KLTLAISQTIN SQLQGWYNRL RDEVVAEWKKVKGKM
Sbjct: 62   DEKKHPGKRPRTYTLTHSDVTSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKM 121

Query: 679  SLHVHCHISGGHSLLNFFARLRFFIFYKELPVVLKAFVYGDVNLFQNYPELEDALVWVYF 500
            SLHVHCHISGGH LL+ FARLR++IF KELPVVLKAFV+GD NL  NYPEL++ALVWVYF
Sbjct: 122  SLHVHCHISGGHFLLDLFARLRYYIFCKELPVVLKAFVHGDKNLLNNYPELQEALVWVYF 181

Query: 499  HSNIHEFNRVECWGPLKDAAAPSDEGGVVKRQEFSSSSSELEKNAWIRPQPCDEDCSCCF 320
            HSNI EFN+VECWGPLK+AA+PS  GGV  +   ++++S    + W  PQPC E CSCCF
Sbjct: 182  HSNIQEFNKVECWGPLKEAASPSSSGGVGGKMRNTNTTS---NSNWDLPQPCQESCSCCF 238

Query: 319  PSTSLIPW 296
            P  SLIPW
Sbjct: 239  PPMSLIPW 246


>ref|XP_002304454.1| predicted protein [Populus trichocarpa] gi|222841886|gb|EEE79433.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  368 bits (944), Expect = 2e-99
 Identities = 179/251 (71%), Positives = 206/251 (82%), Gaps = 2/251 (0%)
 Frame = -1

Query: 1021 LPTQLRPSYLNRRTSLFIYKSRPKKKNHSIVPVARLFGPAIFEASKLKVLFLGVDGKKHP 842
            LP +LRPS  ++ +SLF  K + K+KN SI PVARLFGP+IFEASKLKVLFLGVD KKHP
Sbjct: 10   LPLKLRPSIFDQNSSLFPSKKKLKRKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHP 69

Query: 841  GNLPRTYTLTHSDITAKLTLAISQTINGSQLQGWYNRLYRDEVVAEWKKVKGKMSLHVHC 662
            GNLPRTYTLTHSDITAKLTLAISQTIN SQLQGW N+LYRDEVVAEWKKVKGKMSLHVHC
Sbjct: 70   GNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWSNKLYRDEVVAEWKKVKGKMSLHVHC 129

Query: 661  HISGGHSLLNFFARLRFFIFYKELPVVLKAFVYGDVNLFQNYPELEDALVWVYFHSNIHE 482
            HISGGH LL+   RLR+FIF KELPVVLKAF +GD NLF +YPEL++ALVWVYFHSNI E
Sbjct: 130  HISGGHFLLDLCCRLRYFIFRKELPVVLKAFFHGDGNLFSSYPELQEALVWVYFHSNIPE 189

Query: 481  FNRVECWGPLKDAAAP--SDEGGVVKRQEFSSSSSELEKNAWIRPQPCDEDCSCCFPSTS 308
            FN+VECWGPLKDAAAP  ++ GG  + +E +S+        W  P+PC E+C CCFP  S
Sbjct: 190  FNKVECWGPLKDAAAPCTAESGGPTENKEQASN--------WNLPEPCQENCKCCFPPMS 241

Query: 307  LIPWSQNLSEQ 275
            LIPWS+ + ++
Sbjct: 242  LIPWSEMVPQE 252


>gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249|emb|CAN88917.2|
            chlorophyll retainer (stay green) [Capsicum annuum]
            gi|171903868|gb|ACB56586.1| chlorophyll retainer
            [Capsicum annuum]
          Length = 266

 Score =  365 bits (938), Expect = 9e-99
 Identities = 180/249 (72%), Positives = 206/249 (82%), Gaps = 2/249 (0%)
 Frame = -1

Query: 1036 SATFLLPTQLRPSYLNRRTSLFIYKSRPKK-KNHSIVPVARLFGPAIFEASKLKVLFLGV 860
            +A+ + P++L P    + +SLF+YK+R K  KN SIVPVARLFGPAIFEASKLKVLFLGV
Sbjct: 5    TASLVAPSKLNPE---KHSSLFVYKTRRKSHKNQSIVPVARLFGPAIFEASKLKVLFLGV 61

Query: 859  DGKKHPGNLPRTYTLTHSDITAKLTLAISQTINGSQLQGWYNRLYRDEVVAEWKKVKGKM 680
            D KKHPG LPRTYTLTHSDIT+KLTLAISQTIN SQLQGWYNRL RDEVVAEWKKVKGKM
Sbjct: 62   DEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKM 121

Query: 679  SLHVHCHISGGHSLLNFFARLRFFIFYKELPVVLKAFVYGDVNLFQNYPELEDALVWVYF 500
            SLHVHCHISGGH +L+ FARLR++IF KELPVVLKAFV+GD NL +NYPEL+ ALVWVYF
Sbjct: 122  SLHVHCHISGGHFMLDLFARLRYYIFCKELPVVLKAFVHGDENLLKNYPELQQALVWVYF 181

Query: 499  HSNIHEFNRVECWGPLKDAAAPSDEG-GVVKRQEFSSSSSELEKNAWIRPQPCDEDCSCC 323
            HSNI EFN+VECWGPLKDAA+PS  G G      F+S+S+      W  P+PC+E C+CC
Sbjct: 182  HSNIQEFNKVECWGPLKDAASPSSSGVGGGMNTSFTSNSN----IKWNLPKPCEETCTCC 237

Query: 322  FPSTSLIPW 296
            FP  S+IPW
Sbjct: 238  FPPMSVIPW 246


>ref|NP_001234723.1| senescence-inducible chloroplast stay-green protein 1 [Solanum
            lycopersicum] gi|68510418|gb|AAY98500.1|
            senescence-inducible chloroplast stay-green protein 1
            [Solanum lycopersicum] gi|171903870|gb|ACB56587.1| green
            flesh protein [Solanum lycopersicum]
            gi|257480000|gb|ACV60215.1| green flesh protein [Solanum
            lycopersicum]
          Length = 272

 Score =  361 bits (927), Expect = 2e-97
 Identities = 183/251 (72%), Positives = 210/251 (83%), Gaps = 7/251 (2%)
 Frame = -1

Query: 1003 PSYLN--RRTSLFIYKSRPK-KKNHSIVPVARLFGPAIFEASKLKVLFLGVDGKKHPGNL 833
            PS LN  +++S+FI+K+R K KKN SIVPVARLFGPAIFEASKLKVLFLGVD +KHPG L
Sbjct: 11   PSKLNNEQQSSIFIHKTRRKCKKNQSIVPVARLFGPAIFEASKLKVLFLGVDEEKHPGKL 70

Query: 832  PRTYTLTHSDITAKLTLAISQTINGSQLQGWYNRLYRDEVVAEWKKVKGKMSLHVHCHIS 653
            PRTYTLTHSDIT+KLTLAISQTIN SQLQGWYNRL RDEVVAEWKKVKGKMSLHVHCHIS
Sbjct: 71   PRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHIS 130

Query: 652  GGHSLLNFFARLRFFIFYKELPVVLKAFVYGDVNLFQNYPELEDALVWVYFHSNIHEFNR 473
            GGH +L+ FARLR +IF KELPVVLKAFV+GD NL +NYPEL++ALVWVYFHSNI EFN+
Sbjct: 131  GGHFMLDLFARLRNYIFCKELPVVLKAFVHGDENLLRNYPELQEALVWVYFHSNIQEFNK 190

Query: 472  VECWGPLKDAAAP-SDEGGV--VKRQEFSSSSSELEKNAWIRPQPCDEDCSCCFPSTSLI 302
            VECWGPL+DA +P S  GGV  VK   F+S+S++     W  P+PC+E C+CCFP  S++
Sbjct: 191  VECWGPLRDATSPSSSSGGVGGVKSTSFTSNSNK----KWELPKPCEEACACCFPPVSVM 246

Query: 301  PW-SQNLSEQG 272
            PW S NL   G
Sbjct: 247  PWLSSNLDGVG 257


>ref|XP_002298080.1| predicted protein [Populus trichocarpa] gi|222845338|gb|EEE82885.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  355 bits (910), Expect = 2e-95
 Identities = 174/247 (70%), Positives = 205/247 (82%), Gaps = 3/247 (1%)
 Frame = -1

Query: 1021 LPTQLRPSYLNRRTSLFIYKSRPKKKNHSIVPVARLFGPAIFEASKLKVLFLGVDGKKHP 842
            LP++ RPS  ++ +SLF   ++ K+KN SI PVARLFGP+IFEASKLKVLFLGVD KKHP
Sbjct: 10   LPSKPRPSLFDQNSSLFSSSTKLKRKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHP 69

Query: 841  GNLPRTYTLTHSDITAKLTLAISQTINGSQLQGWYNRLYRDEVVAEWKKVKGKMSLHVHC 662
            GNLPRTYTLTHSD+TAKLTLAISQTIN SQLQGW N+LYRDEVVAEWKKVKG MSLHVHC
Sbjct: 70   GNLPRTYTLTHSDMTAKLTLAISQTINNSQLQGWSNKLYRDEVVAEWKKVKGNMSLHVHC 129

Query: 661  HISGGHSLLNFFARLRFFIFYKELPVVLKAFVYGDVNLFQNYPELEDALVWVYFHSNIHE 482
            HISGGH LL++  RLR+FIF +ELPVVLKAF +GD +L  +YPEL++ALVWVYFHSNI E
Sbjct: 130  HISGGHFLLDWCCRLRYFIFRRELPVVLKAFFHGDGSLLSSYPELQEALVWVYFHSNIPE 189

Query: 481  FNRVECWGPLKDAAAP--SDEGGVVKRQEFSSSSSELEKNAWIRPQPC-DEDCSCCFPST 311
            F++VECWGPLKDAAAP  S+ GG  + +E ++ SS      W  P+PC +E+CSCCFP  
Sbjct: 190  FSKVECWGPLKDAAAPSTSETGGSNETEELANQSSN-----WDLPEPCQEENCSCCFPPM 244

Query: 310  SLIPWSQ 290
            SLIPWS+
Sbjct: 245  SLIPWSK 251


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