BLASTX nr result

ID: Coptis23_contig00022356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022356
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
gb|EAY81382.1| hypothetical protein OsI_36553 [Oryza sativa Indi...   186   2e-45
gb|AFW56294.1| hypothetical protein ZEAMMB73_544245 [Zea mays]        184   5e-45
ref|NP_001169435.1| uncharacterized protein LOC100383306 [Zea ma...   184   5e-45
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...   184   6e-45

>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
           predicted protein [Populus trichocarpa]
          Length = 1239

 Score =  186 bits (473), Expect = 1e-45
 Identities = 88/120 (73%), Positives = 100/120 (83%)
 Frame = -3

Query: 360 GRDIYFDLLDHDKVHCFRMPNQTPFSNFKGIVAKEFGIPVKFQRFWLWTKRQNLTYRPHW 181
           G+DIYFDL+DHDKVH FR+  Q  FS FK  VAKEFGIPV+FQRFW+W KRQN TYRP+ 
Sbjct: 598 GKDIYFDLVDHDKVHNFRIQKQMQFSLFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNR 657

Query: 180 QLTPEEETQSVGQLKEVSNKAHNGDLKLFLEVEVGPDLHPIQLPETTKEDILIFFKLYDP 1
            LTP+EE QSVGQL+EVSNK HN +LKLFLE+E+G DL PI  PE TKEDIL+FFKLYDP
Sbjct: 658 SLTPQEEAQSVGQLREVSNKTHNAELKLFLEIELGLDLRPIAPPEKTKEDILLFFKLYDP 717


>gb|EAY81382.1| hypothetical protein OsI_36553 [Oryza sativa Indica Group]
          Length = 1148

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/120 (71%), Positives = 102/120 (85%)
 Frame = -3

Query: 360 GRDIYFDLLDHDKVHCFRMPNQTPFSNFKGIVAKEFGIPVKFQRFWLWTKRQNLTYRPHW 181
           G+DIYFDL+DH+KV  FR+  Q PF+ FK  VAKE+GIPV+FQRFWLW KRQN TYRP+ 
Sbjct: 580 GKDIYFDLVDHEKVRSFRIQKQLPFTTFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNR 639

Query: 180 QLTPEEETQSVGQLKEVSNKAHNGDLKLFLEVEVGPDLHPIQLPETTKEDILIFFKLYDP 1
            L+P EETQSVGQL+EVSNKAHN +LKLFLEVE+GPDL P+  PE +KEDIL+FFKLY+P
Sbjct: 640 PLSPHEETQSVGQLREVSNKAHNAELKLFLEVELGPDLRPLPPPEKSKEDILLFFKLYNP 699


>gb|AFW56294.1| hypothetical protein ZEAMMB73_544245 [Zea mays]
          Length = 653

 Score =  184 bits (468), Expect = 5e-45
 Identities = 86/119 (72%), Positives = 103/119 (86%)
 Frame = -3

Query: 360 GRDIYFDLLDHDKVHCFRMPNQTPFSNFKGIVAKEFGIPVKFQRFWLWTKRQNLTYRPHW 181
           G++IYFDL+DH+KVH FR+  Q PF++FK  VAKEFGIPV+FQRFWLW KRQN TYRP+ 
Sbjct: 118 GKNIYFDLVDHEKVHSFRIQKQLPFTSFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNR 177

Query: 180 QLTPEEETQSVGQLKEVSNKAHNGDLKLFLEVEVGPDLHPIQLPETTKEDILIFFKLYD 4
            LTP EE QSVGQL+EVSNKAHN +LKLFLEVE+GP+L PI+ PE +KEDIL+FFKLY+
Sbjct: 178 PLTPHEEAQSVGQLREVSNKAHNAELKLFLEVELGPELCPIRPPEKSKEDILLFFKLYN 236


>ref|NP_001169435.1| uncharacterized protein LOC100383306 [Zea mays]
           gi|224029369|gb|ACN33760.1| unknown [Zea mays]
          Length = 601

 Score =  184 bits (468), Expect = 5e-45
 Identities = 86/119 (72%), Positives = 103/119 (86%)
 Frame = -3

Query: 360 GRDIYFDLLDHDKVHCFRMPNQTPFSNFKGIVAKEFGIPVKFQRFWLWTKRQNLTYRPHW 181
           G++IYFDL+DH+KVH FR+  Q PF++FK  VAKEFGIPV+FQRFWLW KRQN TYRP+ 
Sbjct: 66  GKNIYFDLVDHEKVHSFRIQKQLPFTSFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNR 125

Query: 180 QLTPEEETQSVGQLKEVSNKAHNGDLKLFLEVEVGPDLHPIQLPETTKEDILIFFKLYD 4
            LTP EE QSVGQL+EVSNKAHN +LKLFLEVE+GP+L PI+ PE +KEDIL+FFKLY+
Sbjct: 126 PLTPHEEAQSVGQLREVSNKAHNAELKLFLEVELGPELCPIRPPEKSKEDILLFFKLYN 184


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1109

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/120 (73%), Positives = 99/120 (82%)
 Frame = -3

Query: 360 GRDIYFDLLDHDKVHCFRMPNQTPFSNFKGIVAKEFGIPVKFQRFWLWTKRQNLTYRPHW 181
           G+DIYFDL+DHDKV  FR+  Q PF+ FK  V KEFGIPV+FQRFWLW KRQN TYRP+ 
Sbjct: 580 GKDIYFDLVDHDKVRSFRIQKQMPFNLFKEEVVKEFGIPVQFQRFWLWAKRQNHTYRPNR 639

Query: 180 QLTPEEETQSVGQLKEVSNKAHNGDLKLFLEVEVGPDLHPIQLPETTKEDILIFFKLYDP 1
            LTP+EE QSVGQL+EVSNKA+N +LKLFLEVE G DL PI  PE TKEDIL+FFKLYDP
Sbjct: 640 PLTPQEEAQSVGQLREVSNKANNAELKLFLEVEFGQDLRPIPPPEKTKEDILLFFKLYDP 699


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