BLASTX nr result

ID: Coptis23_contig00022351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022351
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...   162   2e-37
ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2...   157   5e-36
gb|ABR17868.1| unknown [Picea sitchensis]                             142   1e-31
ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]     139   8e-31
gb|AAP31312.2| ABI3-interacting protein 2 [Callitropsis nootkate...   139   1e-30

>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
           gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
           [Ricinus communis]
          Length = 491

 Score =  162 bits (409), Expect = 2e-37
 Identities = 95/266 (35%), Positives = 142/266 (53%), Gaps = 10/266 (3%)
 Frame = +3

Query: 9   DKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNHSV 188
           DKI D +QKL  +GKQL AVKF++ F L DKF P PLL+D+ K+SK+   ++  +  +SV
Sbjct: 257 DKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPAPLLRDHLKESKEFTDKVCKEEKNSV 316

Query: 189 QSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGP---- 356
           ++ NEA ++E+ A+K++++ I+EHNLE  YP   L+KR+E LEKQKA +K  A  P    
Sbjct: 317 KAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDLEKRIEMLEKQKADRKVAAPSPDNRP 376

Query: 357 ------TPADKKQQQQFGNKRPKPAETRXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSA 518
                     KKQQQ  G ++ K  + +            + +P  + +           
Sbjct: 377 RQQPKKQQLSKKQQQHQGKQQAKKQQLK-----------GNKRPRMAML----------- 414

Query: 519 QYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSSESHLA 698
                   P   P   +     G +A P   YGLA   + +  + SP R+H YSS SH++
Sbjct: 415 ------PGPAAVPISIAGPSSAGASAGP---YGLAGAGMCFPGNPSPVRAHPYSSNSHMS 465

Query: 699 AGLYDRSMGYGGHGMPPSHRSSFYPQ 776
           +  YDRS  +GG+G PP +   +YPQ
Sbjct: 466 SSYYDRSAAFGGYGFPPQYCPGYYPQ 491


>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  157 bits (396), Expect = 5e-36
 Identities = 96/262 (36%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
 Frame = +3

Query: 9    DKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNHSV 188
            +K  D IQKL  +GKQ  AVKF++ F LVDKF PVPLLK + K+SK++ +++   G +S+
Sbjct: 297  EKTADLIQKLIDSGKQFLAVKFIFEFGLVDKFQPVPLLKAHLKESKRLTKKVCQDGKNSI 356

Query: 189  QSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGPTPAD 368
               NEA ++E+  +K+ +  I+E+ L S+YPR  L KR+E LEKQKA+       P+   
Sbjct: 357  NQQNEARSREVKTLKSALVLIDEYKLGSEYPRMDLKKRIEMLEKQKAAAASAVDEPSHQP 416

Query: 369  KKQQQQFGNKRPKPAET------RXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSAQYGL 530
            KKQQQ  G+KRP+ + T                   HLQP S         + ++  YG 
Sbjct: 417  KKQQQA-GSKRPRTSATAVQNSNNGSNPVIPPFKQSHLQPAS--------LLLAAGPYGS 467

Query: 531  VGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSSESHLAAGLY 710
            VG+      Y     G YG A    +  G   NP S       + +H Y  ESH+ +  Y
Sbjct: 468  VGSISPAILYAGPPAGPYGLAR---AGTGFPGNPRS-------ALAHQYFPESHVPSDHY 517

Query: 711  DRSMGYGGHGMPPSHRSSFYPQ 776
            DR+  YGG+ +P  +   +YPQ
Sbjct: 518  DRAAAYGGYDLPLKYHPGYYPQ 539


>gb|ABR17868.1| unknown [Picea sitchensis]
          Length = 601

 Score =  142 bits (359), Expect = 1e-31
 Identities = 100/270 (37%), Positives = 135/270 (50%), Gaps = 15/270 (5%)
 Frame = +3

Query: 3    MPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNH 182
            +  K+PD ++ L ++G+Q+EAV F +AF L +KFPPVPLLK+Y K +KK +Q     GN+
Sbjct: 345  LESKMPDVVETLVNSGRQIEAVNFAHAFGLTEKFPPVPLLKEYLKDAKKASQASLKSGNN 404

Query: 183  SVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGPTP 362
            S  + NEA  KEL+A +A+IKCIEEH LESQ+    L KRV QLEK KA +KR A     
Sbjct: 405  STAAQNEANTKELSAYRAVIKCIEEHKLESQFSPDPLQKRVAQLEKAKADRKRSAGAVKS 464

Query: 363  ADKKQQQQFGN----KRPKPAETRXXXXXXXXXXXXHLQPMSSFVDRFPPYMSSSAQYGL 530
              K+ +   GN      P  A  R             L   S+  DR         QY  
Sbjct: 465  QPKRPRANGGNAGVYMPPLSAAERTPA----------LYASSNAADRSFYRSLDRVQYS- 513

Query: 531  VGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYSSE----SHLA 698
             G  P V  Y  +  G   +  +    YG A   V     +S SR ++Y S+    S L 
Sbjct: 514  -GAAPGVTSY--NLQGQSAYDRSNQGIYGAAYG-VGNRSPVSLSRPYMYPSDNMGPSLLG 569

Query: 699  AGLYDRSMGYGGHGM-------PPSHRSSF 767
            +G Y+ S  Y  H         PP+++SSF
Sbjct: 570  SGSYNSSTNYNNHHFGSGLPPPPPAYQSSF 599


>ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 519

 Score =  139 bits (351), Expect = 8e-31
 Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 14/272 (5%)
 Frame = +3

Query: 3    MPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNH 182
            + DK P  +QKL    K + AVKFV+ F L  K PPVP+L+ +  +S+K+ + +  +G  
Sbjct: 266  LTDKAPGLVQKLIDRSKHILAVKFVFEFNLAHKIPPVPILEAHVNESQKLVKRLSEEG-- 323

Query: 183  SVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPA----V 350
              +SL+E TA+E+ A+K+ IK IE HNL+S+YP   L +R+EQL K KA+ K  A     
Sbjct: 324  --KSLSEITAREIHALKSAIKVIESHNLQSEYPPESLQQRIEQLMKHKANVKYAASAFSA 381

Query: 351  GPTPADKKQQQQFGNKRPKPAE---------TRXXXXXXXXXXXXHLQPMSSFVDRFPPY 503
             P P    QQQQ G KRP+ +E         +             H Q     ++   PY
Sbjct: 382  KPPP---HQQQQSGIKRPRMSEPVGSASVLNSASGASSTVHYQQPHFQSSGLLLEHLNPY 438

Query: 504  MS-SSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSHLYS 680
            M+  +  YG+    P++ PY  ++ G YG    P+   G          +     S   S
Sbjct: 439  MNLPTMPYGMKAQTPSIPPYTGASTGPYGPDGVPMGPSG----------NRGQGGSLPIS 488

Query: 681  SESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 776
            SE  + +G YD    YGG+G+   +++S YPQ
Sbjct: 489  SEPLMPSGYYDSGSAYGGYGLQHYYQTS-YPQ 519


>gb|AAP31312.2| ABI3-interacting protein 2 [Callitropsis nootkatensis]
          Length = 672

 Score =  139 bits (350), Expect = 1e-30
 Identities = 101/268 (37%), Positives = 139/268 (51%), Gaps = 11/268 (4%)
 Frame = +3

Query: 3    MPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKKVAQEIRNKGNH 182
            + +K+P  +  L +NGKQ+EAV F +   LVD +PPVPLLK Y K+++K AQ     GN 
Sbjct: 394  LEEKLPGVMDTLINNGKQIEAVNFAFTCGLVDTYPPVPLLKAYLKEARKAAQV--KSGNT 451

Query: 183  SVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKASKKRPAVGPTP 362
            SV + NEA A+EL A+KA++KCIEEHNLES+YP   L KRV QLEK K  KKR A G   
Sbjct: 452  SVAAQNEANARELFALKAVVKCIEEHNLESEYPSDTLRKRVLQLEKAKTDKKRSADGIKS 511

Query: 363  ADKKQQQQFGNKRPKPAETRXXXXXXXXXXXXHLQPMSSF--VDR--FPPYMSSSAQYGL 530
              KK +    N       T             +   MS +   DR  +P  + S+  Y L
Sbjct: 512  QYKKPRT---NTAGGYLPTASGIDRSGVFATANAADMSLYRSADRVQYPSSVLSANSYNL 568

Query: 531  VGTPPTVAPYMNSAVGHYGFAANP----VSSYGLATNPVSYGRHLSPS-RSHLYSSESHL 695
                P  + Y  S+ G YG ++ P     SS  L ++ +  G + + S  +  Y++ S+ 
Sbjct: 569  ----PVQSGYDRSSQGIYGTSSLPRSYAYSSDNLGSSALGSGSYNAASYNAGSYNAASYN 624

Query: 696  AAGLYDRS--MGYGGHGMPPSHRSSFYP 773
             A     S    Y G G+PP H +S  P
Sbjct: 625  GASYNGASNYSSYPGSGLPPVHPTSTRP 652


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