BLASTX nr result

ID: Coptis23_contig00022343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022343
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [...    82   5e-14
ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...    79   5e-13
ref|XP_002531750.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_003603263.1| hypothetical protein MTR_3g105690 [Medicago ...    74   1e-11
ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus]
          Length = 179

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
 Frame = +2

Query: 2   AMLGXXXXXXXXXXCSYWKISRFLHQGDENNEERDLEKAQDSIK--ACPVFEEKIVVIMA 175
           AMLG          CSYWK+S +L   D  N E DLE   D  +  A PVFEEKI+VIMA
Sbjct: 45  AMLGLIAFALLILACSYWKLSGYLDGSDAANREPDLEAGADDTQKQASPVFEEKILVIMA 104

Query: 176 GDDNPTYLATPVFTNKVSSFHQDNETISNEKEAAVSEKNEDE----KEPKQNTDEQHQRL 343
           G+  PTYLATP+ +   S     + T  + K ++  +K E      +  K +T +Q ++ 
Sbjct: 105 GEMKPTYLATPMSSRSSSFGDTKSNTSCSSKGSSTGDKEEKSVGLTETVKHSTADQEKQS 164

Query: 344 EETRETQDDA 373
            + RET + +
Sbjct: 165 IDNRETPESS 174


>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
 Frame = +2

Query: 2   AMLGXXXXXXXXXXCSYWKISRFLHQGDENNEERDLEKAQ----DSIKACPVFEEKIVVI 169
           AMLG          CSYWK+S +L +GD+++  RD E       D++K    FEEKI+VI
Sbjct: 38  AMLGLIAFALLILACSYWKLSGYL-EGDDDSVARDAEAGDGAGGDAVKPPMAFEEKILVI 96

Query: 170 MAGDDNPTYLATPVFTNKVSSF--HQDNETISNEKEAAVSEKNEDEKEPKQNTDEQHQRL 343
           MAGD  PTYLATP+ +++ SSF     N +   EK  AV+E       PKQ ++ Q Q  
Sbjct: 97  MAGDVKPTYLATPM-SSRASSFGERSSNNSEMTEKSEAVAE------SPKQGSENQVQTG 149

Query: 344 E-ETRET 361
             E+RET
Sbjct: 150 NGESRET 156


>ref|XP_002531750.1| conserved hypothetical protein [Ricinus communis]
           gi|223528620|gb|EEF30639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
 Frame = +2

Query: 2   AMLGXXXXXXXXXXCSYWKISRFLHQGDENNEERDLEKA-------QDSIKACPVFEEKI 160
           AMLG          CSYWK+S +L  G+E  E RDLE          +  +   VFEEK 
Sbjct: 32  AMLGLIAFALVILACSYWKLSGYLENGNEGGE-RDLEAGGGEGGDNNEKQRQGVVFEEKF 90

Query: 161 VVIMAGDDNPTYLATPVFTNKVSSFHQDNETISNEKEAAVSEKNEDEKEPKQNTDEQHQR 340
           +VIMAG+  PT+LATP+ +++ SSF  D ++ S  +++  S +N   +  KQ+  EQ  R
Sbjct: 91  LVIMAGEVKPTFLATPM-SSRSSSF-GDTKSCSCGEKSEKSTENCTAETVKQSDQEQSSR 148

Query: 341 LEETRETQDDASHQ 382
           L ET  TQ+  S Q
Sbjct: 149 L-ETTTTQESISDQ 161


>ref|XP_003603263.1| hypothetical protein MTR_3g105690 [Medicago truncatula]
           gi|355492311|gb|AES73514.1| hypothetical protein
           MTR_3g105690 [Medicago truncatula]
          Length = 194

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
 Frame = +2

Query: 2   AMLGXXXXXXXXXXCSYWKISRFLHQGDENNEERDLEKAQD----SIKACPVFEEKIVVI 169
           AMLG          CSYW+++  L   + N+  R++E  ++    + ++  V+EEK++VI
Sbjct: 41  AMLGLIAFALLILACSYWRLTGQLLDEENNSNNRNMENEKEGENSNKESVKVYEEKVLVI 100

Query: 170 MAGDDNPTYLATPVFTNKVSSFHQD----NETISNEKEAAVSEKNEDEKEPKQNTDEQHQ 337
           MAGD NPT+LATPVF    S  + D    +E   N +    SEK E E E +  +D +  
Sbjct: 101 MAGDQNPTFLATPVFPKSSSVMNLDANHSDEQRENHETVEKSEKEEMETEEQSQSDGKKT 160

Query: 338 RL 343
           R+
Sbjct: 161 RV 162


>ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|222855673|gb|EEE93220.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
 Frame = +2

Query: 2   AMLGXXXXXXXXXXCSYWKISRFLHQGDENNEERDLEKAQDSIKACP------VFEEKIV 163
           AMLG          CSYW++S  L   +E N++RDLE   +   + P      V+EEK +
Sbjct: 43  AMLGLIAFALLILACSYWRLSSRLDSENEGNDQRDLESGNEKEGSNPGKAEKRVYEEKFL 102

Query: 164 VIMAGDDNPTYLATPVFTNKVSSFHQ-DNETISNEKEAAVSEKNEDEKEPKQNTDEQHQR 340
           VIMAG+  PT+LATPV +   SS  Q DN+     +      K ++E+    + D+    
Sbjct: 103 VIMAGNQKPTFLATPVCSKVSSSGAQIDNQEEEKTESTGDHYKLKNEEMIGDSHDQARTT 162

Query: 341 LEETRETQDDASHQE 385
            EE  ETQ++   ++
Sbjct: 163 AEENIETQENQQEEQ 177


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