BLASTX nr result

ID: Coptis23_contig00022337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022337
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...   130   2e-28
ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...   128   9e-28
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...   127   3e-27
ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265...   123   4e-26

>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
 Frame = -2

Query: 632 TLPSSKFPTNSV----SNYGFQKSLIITKCEQTNDSSELSADRNST-LKIGSAIIVVDAP 468
           T+P +K   + +    +N+      + TKC+    SSE S     T L IGS I+VV+AP
Sbjct: 10  TIPYTKLHNSILQFTNANFRTPSFSVATKCQSQESSSETSPPAKITKLAIGSPIVVVEAP 69

Query: 467 KTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDLDE 291
           K IKTAASVPCLRVN+ LVK GDVGRIV+RKPKDVWAVRL+IGTYLIDGK+F+PL+L E
Sbjct: 70  KMIKTAASVPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLSIGTYLIDGKYFKPLELAE 128


>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 7/124 (5%)
 Frame = -2

Query: 641 SSVTLPSSKFPT----NSVSNYGFQKSLIITKCEQTNDSSE---LSADRNSTLKIGSAII 483
           S+ T+P +  PT    +S++N   +K  +IT+CE    SS    L A   + L IGS ++
Sbjct: 7   STSTIPRTN-PTLQSNHSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSPVV 65

Query: 482 VVDAPKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPL 303
           V++APK IKTAA++PCLRVN   VK GDVGRIV+RKPKDVWAVRLAIGTYLIDGK+F+PL
Sbjct: 66  VIEAPKMIKTAATMPCLRVNTGFVKPGDVGRIVSRKPKDVWAVRLAIGTYLIDGKYFKPL 125

Query: 302 DLDE 291
           +L E
Sbjct: 126 ELSE 129


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score =  128 bits (322), Expect = 9e-28
 Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 4/120 (3%)
 Frame = -2

Query: 638 SVTLPSSKFPTNSVSNYGFQKS----LIITKCEQTNDSSELSADRNSTLKIGSAIIVVDA 471
           ++T P  +    S  N   Q+     + + +CE    SSEL  +++S L+IGS II ++A
Sbjct: 8   AITKPFLRVQDRSSMNCELQRPKNGVVALIRCESKESSSELP-EKHSKLEIGSPIIFIEA 66

Query: 470 PKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDLDE 291
           PK IKTAA++PCLRVN+ LVK GDVGRIV+RKPKDVWAVRL IGTYL+DGK+F+PLDL E
Sbjct: 67  PKMIKTAATMPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLRIGTYLVDGKYFKPLDLAE 126


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score =  127 bits (318), Expect = 3e-27
 Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 5/118 (4%)
 Frame = -2

Query: 635 VTLPSSKFPTNSVSNYGFQK----SLIITKCEQTNDSSELSA-DRNSTLKIGSAIIVVDA 471
           +T P  KF  NS   Y  Q     S+ + +CE  + S E    ++ S L  GS II+++A
Sbjct: 9   ITKPFLKF--NSSLKYQQQHRPNISVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEA 66

Query: 470 PKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDL 297
           PK IKTAASVPCLRVN+ LVK GDVGRIV+RKPKDVWAVRL+IGTYLIDGK+F+PLDL
Sbjct: 67  PKMIKTAASVPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLSIGTYLIDGKYFKPLDL 124


>ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera]
           gi|296084005|emb|CBI24393.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  123 bits (308), Expect = 4e-26
 Identities = 60/95 (63%), Positives = 75/95 (78%)
 Frame = -2

Query: 578 KSLIITKCEQTNDSSELSADRNSTLKIGSAIIVVDAPKTIKTAASVPCLRVNADLVKTGD 399
           KS++  +     +  E S+ + S L+IGS IIV++APK +KTAASVPCLR NA LVK GD
Sbjct: 19  KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEAPKVLKTAASVPCLRANAGLVKAGD 78

Query: 398 VGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDLD 294
           VGR+V+RKPKDVWAVRL+IGTYLID K+F+PL LD
Sbjct: 79  VGRVVSRKPKDVWAVRLSIGTYLIDAKYFKPLTLD 113


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