BLASTX nr result
ID: Coptis23_contig00022335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00022335
(733 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243... 263 1e-75
emb|CBI20080.3| unnamed protein product [Vitis vinifera] 263 1e-75
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2... 254 2e-75
ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric... 243 6e-72
ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [S... 231 3e-67
>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
Length = 1091
Score = 263 bits (672), Expect(2) = 1e-75
Identities = 126/200 (63%), Positives = 154/200 (77%), Gaps = 2/200 (1%)
Frame = +3
Query: 138 NLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDASCGI 317
N QFLAAFS+AAGK S QF ESDESDPEWG W+A+ E ++PS++I+FPTIERVK++SCGI
Sbjct: 814 NAQFLAAFSAAAGKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSSCGI 873
Query: 318 RPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFGWVY 497
P RR+LC SE TWQRL++ HDAIP+PS RV +PMHVKVA+RRF S +SSSFGWVY
Sbjct: 874 LPSRRILCFSEKTWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFGWVY 933
Query: 498 CGSHNFSPAAWGRPTTST-GLK-FGVAETNCSLGARLHICNYELGIIFIVPPVNISEEIS 671
CGSHNFS AAWGRP ++ G+K G + + RLHICNYELGIIFI PP +
Sbjct: 934 CGSHNFSAAAWGRPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKGNGN 993
Query: 672 QQNLSFDDITLPFILPAPKY 731
Q + + DD+ LPF++PAPKY
Sbjct: 994 QSSTNLDDVVLPFVMPAPKY 1013
Score = 47.0 bits (110), Expect(2) = 1e-75
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 1 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEV 114
G F+ I + EH+++ICSLVASL+RCVGL RLQE+
Sbjct: 751 GASFSYILKMMQPEHLSAICSLVASLKRCVGLWRLQEI 788
>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
Length = 1032
Score = 263 bits (672), Expect(2) = 1e-75
Identities = 126/200 (63%), Positives = 154/200 (77%), Gaps = 2/200 (1%)
Frame = +3
Query: 138 NLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDASCGI 317
N QFLAAFS+AAGK S QF ESDESDPEWG W+A+ E ++PS++I+FPTIERVK++SCGI
Sbjct: 755 NAQFLAAFSAAAGKRSLQFFESDESDPEWGCWSASQESRSPSIKIVFPTIERVKNSSCGI 814
Query: 318 RPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFGWVY 497
P RR+LC SE TWQRL++ HDAIP+PS RV +PMHVKVA+RRF S +SSSFGWVY
Sbjct: 815 LPSRRILCFSEKTWQRLKNVSTIHDAIPHPSDRVKHPMHVKVAQRRFQSKMDSSSFGWVY 874
Query: 498 CGSHNFSPAAWGRPTTST-GLK-FGVAETNCSLGARLHICNYELGIIFIVPPVNISEEIS 671
CGSHNFS AAWGRP ++ G+K G + + RLHICNYELGIIFI PP +
Sbjct: 875 CGSHNFSAAAWGRPISNPFGIKTTGTHKADSCFDQRLHICNYELGIIFIFPPSATKGNGN 934
Query: 672 QQNLSFDDITLPFILPAPKY 731
Q + + DD+ LPF++PAPKY
Sbjct: 935 QSSTNLDDVVLPFVMPAPKY 954
Score = 47.0 bits (110), Expect(2) = 1e-75
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 1 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEV 114
G F+ I + EH+++ICSLVASL+RCVGL RLQE+
Sbjct: 692 GASFSYILKMMQPEHLSAICSLVASLKRCVGLWRLQEI 729
>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
predicted protein [Populus trichocarpa]
Length = 1131
Score = 254 bits (650), Expect(2) = 2e-75
Identities = 127/200 (63%), Positives = 149/200 (74%), Gaps = 2/200 (1%)
Frame = +3
Query: 138 NLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDASCGI 317
N QFLAAFS+AAGK S + +S+ESDPEWG W+A+ E +NPS++IIFPTIERVK+A GI
Sbjct: 858 NAQFLAAFSAAAGKRSPELFDSEESDPEWGCWSASQELRNPSIKIIFPTIERVKNACNGI 917
Query: 318 RPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFGWVY 497
P RR+LC SE TWQRLRS I HDAIP+P RVG PMHVKVARRRF S TN+SSFGWVY
Sbjct: 918 SPSRRILCFSEKTWQRLRSVGILHDAIPHPYDRVGQPMHVKVARRRFQSKTNASSFGWVY 977
Query: 498 CGSHNFSPAAWGRPTTST-GLKF-GVAETNCSLGARLHICNYELGIIFIVPPVNISEEIS 671
CGSHNFS AAWGR ++ GLK +TN L +RLH+ NYELGIIF PP +
Sbjct: 978 CGSHNFSAAAWGRLISNPFGLKSKETGKTNTYLSSRLHVSNYELGIIFTFPPTETKGITN 1037
Query: 672 QQNLSFDDITLPFILPAPKY 731
+ + DDI LPF +PAPKY
Sbjct: 1038 KDCTNLDDIVLPFAVPAPKY 1057
Score = 54.3 bits (129), Expect(2) = 2e-75
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 1 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEV 114
GPCF + SL TEHV + CSLVAS+QRC G+ RL+EV
Sbjct: 796 GPCFPNMMSLMQTEHVLAFCSLVASIQRCTGIWRLEEV 833
>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
gi|223550173|gb|EEF51660.1| tyrosyl-DNA
phosphodiesterase, putative [Ricinus communis]
Length = 1148
Score = 243 bits (620), Expect(2) = 6e-72
Identities = 125/218 (57%), Positives = 148/218 (67%), Gaps = 20/218 (9%)
Frame = +3
Query: 138 NLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDASCGI 317
N QFL+AFS+AAGK S Q +S+ESDPEWG W + E +NPS+RIIFPTIERVK+A GI
Sbjct: 854 NAQFLSAFSAAAGKRSLQLFDSEESDPEWGCWTKSQELRNPSIRIIFPTIERVKNACNGI 913
Query: 318 RPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVK------------------V 443
RR+LC SE TWQRLRSA+I HDA+P+P RVG+PMHVK V
Sbjct: 914 LSSRRILCFSENTWQRLRSAEILHDAVPHPYDRVGHPMHVKWPLNILYTRETDRENCKQV 973
Query: 444 ARRRFYSNTNSSSFGWVYCGSHNFSPAAWGRPTTST-GLKFG-VAETNCSLGARLHICNY 617
ARR F S T+ SS GWVYCGSHNFS AAWGRP GLK +TN S G RLH+CNY
Sbjct: 974 ARRCFQSKTDVSSSGWVYCGSHNFSAAAWGRPICHPFGLKSNEPGKTNLSSGLRLHVCNY 1033
Query: 618 ELGIIFIVPPVNISEEISQQNLSFDDITLPFILPAPKY 731
ELGIIF+ PP ++ + DD+ LPF++PAPKY
Sbjct: 1034 ELGIIFVFPPSRTKGIDNKDAATLDDVVLPFVVPAPKY 1071
Score = 54.3 bits (129), Expect(2) = 6e-72
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 1 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEV 114
GPCF +I + +HV ++CSLVAS+QRC GL RLQEV
Sbjct: 791 GPCFPDIMKMMLPQHVIAVCSLVASIQRCTGLWRLQEV 828
>ref|XP_002446388.1| hypothetical protein SORBIDRAFT_06g015125 [Sorghum bicolor]
gi|241937571|gb|EES10716.1| hypothetical protein
SORBIDRAFT_06g015125 [Sorghum bicolor]
Length = 972
Score = 231 bits (589), Expect(2) = 3e-67
Identities = 110/198 (55%), Positives = 134/198 (67%)
Frame = +3
Query: 138 NLQFLAAFSSAAGKMSTQFPESDESDPEWGRWNANAEFKNPSMRIIFPTIERVKDASCGI 317
N QF+A+F+SAAGK Q +S ESDPEWG W N E K PS+ ++FPTI+RVK +CGI
Sbjct: 700 NPQFIASFASAAGKRPHQDFDSQESDPEWGCWTTNHELKKPSISLLFPTIDRVKKGACGI 759
Query: 318 RPFRRLLCLSEGTWQRLRSADIFHDAIPYPSHRVGYPMHVKVARRRFYSNTNSSSFGWVY 497
+ R LL L E TWQRLRS IFHDAIP P R+G+PMHVKVA+RRF S SFGW Y
Sbjct: 760 QLCRNLLSLPEKTWQRLRSTGIFHDAIPQPYARIGHPMHVKVAQRRFKSCFGEHSFGWTY 819
Query: 498 CGSHNFSPAAWGRPTTSTGLKFGVAETNCSLGARLHICNYELGIIFIVPPVNISEEISQQ 677
CGSHNFSPAAWG+P + + G RLHICNYELGI+ I PP +S+ S+
Sbjct: 820 CGSHNFSPAAWGQPLSPPSKANPSKARSSPSGPRLHICNYELGIVLIAPPPGMSKHASES 879
Query: 678 NLSFDDITLPFILPAPKY 731
+ I LPF++P P+Y
Sbjct: 880 RHRIEGIVLPFVIPPPRY 897
Score = 50.8 bits (120), Expect(2) = 3e-67
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 1 GPCFTEISSLFCTEHVASICSLVASLQRCVGLSRLQEV 114
GP F++IS L EH +CSL+ASLQRC+GL RL+EV
Sbjct: 637 GPEFSQISGLISNEHFPPLCSLIASLQRCLGLWRLEEV 674