BLASTX nr result
ID: Coptis23_contig00022325
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00022325
(1044 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23243.3| unnamed protein product [Vitis vinifera] 379 e-103
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot... 379 e-103
ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|2... 375 e-102
ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [... 375 e-101
ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing prot... 372 e-101
>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
Length = 1013
Score = 379 bits (972), Expect = e-103
Identities = 177/218 (81%), Positives = 197/218 (90%)
Frame = -1
Query: 1044 QGRVASTGTRDSTLDILVGDDGWVDHRENGIMYSFDATKCMFSWGNLSEKLRMACLDCKG 865
QGRVA +GTRDSTL+ILVGD+GWVDH ENGI+YSFDATKCMFSWGNLSEKLRM CL+C+
Sbjct: 793 QGRVAPSGTRDSTLEILVGDNGWVDHCENGILYSFDATKCMFSWGNLSEKLRMGCLNCRD 852
Query: 864 EVLVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNFVGDRCVILEGDNR 685
EV+VDLFAGIGYFVLPFLV AKAK+VYACEWNPHA+EALQ N+ +N V DRC+ILEGDNR
Sbjct: 853 EVIVDLFAGIGYFVLPFLVSAKAKLVYACEWNPHAVEALQHNLLANSVADRCIILEGDNR 912
Query: 684 ATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQ 505
TAPKGVADRVCLGLLPSSEGSW TAVRALR EGGMLHVHG AKDSEE WS+HV+ SI
Sbjct: 913 LTAPKGVADRVCLGLLPSSEGSWATAVRALRTEGGMLHVHGNAKDSEEGSWSEHVSKSIC 972
Query: 504 NIAKSEGLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 391
++A+SEG WEVSV+H+ERVKWY PHIRHLV DVRC+Q
Sbjct: 973 DLARSEGYDWEVSVEHVERVKWYAPHIRHLVADVRCRQ 1010
>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
vinifera]
Length = 1018
Score = 379 bits (972), Expect = e-103
Identities = 177/218 (81%), Positives = 197/218 (90%)
Frame = -1
Query: 1044 QGRVASTGTRDSTLDILVGDDGWVDHRENGIMYSFDATKCMFSWGNLSEKLRMACLDCKG 865
QGRVA +GTRDSTL+ILVGD+GWVDH ENGI+YSFDATKCMFSWGNLSEKLRM CL+C+
Sbjct: 798 QGRVAPSGTRDSTLEILVGDNGWVDHCENGILYSFDATKCMFSWGNLSEKLRMGCLNCRD 857
Query: 864 EVLVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNFVGDRCVILEGDNR 685
EV+VDLFAGIGYFVLPFLV AKAK+VYACEWNPHA+EALQ N+ +N V DRC+ILEGDNR
Sbjct: 858 EVIVDLFAGIGYFVLPFLVSAKAKLVYACEWNPHAVEALQHNLLANSVADRCIILEGDNR 917
Query: 684 ATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQ 505
TAPKGVADRVCLGLLPSSEGSW TAVRALR EGGMLHVHG AKDSEE WS+HV+ SI
Sbjct: 918 LTAPKGVADRVCLGLLPSSEGSWATAVRALRTEGGMLHVHGNAKDSEEGSWSEHVSKSIC 977
Query: 504 NIAKSEGLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 391
++A+SEG WEVSV+H+ERVKWY PHIRHLV DVRC+Q
Sbjct: 978 DLARSEGYDWEVSVEHVERVKWYAPHIRHLVADVRCRQ 1015
>ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|222847872|gb|EEE85419.1|
predicted protein [Populus trichocarpa]
Length = 1031
Score = 375 bits (964), Expect = e-102
Identities = 173/216 (80%), Positives = 194/216 (89%)
Frame = -1
Query: 1044 QGRVASTGTRDSTLDILVGDDGWVDHRENGIMYSFDATKCMFSWGNLSEKLRMACLDCKG 865
QGRVASTGTRDSTL+ILVGD+GWVDHRENGI+YSFDATKCMFSWGNLSEKLRM L+CK
Sbjct: 813 QGRVASTGTRDSTLEILVGDNGWVDHRENGILYSFDATKCMFSWGNLSEKLRMGNLECKD 872
Query: 864 EVLVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNFVGDRCVILEGDNR 685
EV+VDLFAGIGYF LPFLVRAKAK+VYACEWNPHA+EAL+RN+E N V DRC++LEGDNR
Sbjct: 873 EVIVDLFAGIGYFTLPFLVRAKAKLVYACEWNPHAVEALRRNLEVNSVSDRCIVLEGDNR 932
Query: 684 ATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQ 505
TAPKG+A+RVCLGLLP+SE SW TAVRALR EGGMLHVHG KDS+ES+W+ HV SI
Sbjct: 933 MTAPKGIANRVCLGLLPTSEDSWATAVRALRSEGGMLHVHGNVKDSQESLWTAHVLKSID 992
Query: 504 NIAKSEGLCWEVSVQHLERVKWYGPHIRHLVLDVRC 397
IA+ EG CWEVS++H+ERVKWY PHIRHLV DVRC
Sbjct: 993 EIARFEGHCWEVSIEHVERVKWYAPHIRHLVADVRC 1028
>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
protein 2/3/4 [Medicago truncatula]
Length = 1046
Score = 375 bits (963), Expect = e-101
Identities = 173/218 (79%), Positives = 198/218 (90%)
Frame = -1
Query: 1044 QGRVASTGTRDSTLDILVGDDGWVDHRENGIMYSFDATKCMFSWGNLSEKLRMACLDCKG 865
QG VA+TGTRDSTL+ILVGDDGWV+HRENGI YSF+ATKCMFSWGNLSEKLRMA +DCK
Sbjct: 826 QGPVAATGTRDSTLEILVGDDGWVNHRENGIHYSFNATKCMFSWGNLSEKLRMAQMDCKD 885
Query: 864 EVLVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNFVGDRCVILEGDNR 685
EV+VDLFAGIGYFVLPFLVRA AK+VYACEWNPHA+EAL+ N++SN V +RC+++EGDNR
Sbjct: 886 EVIVDLFAGIGYFVLPFLVRAHAKLVYACEWNPHAIEALRHNLQSNSVAERCIVIEGDNR 945
Query: 684 ATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQ 505
TAPKGVADRVCLGLLPSSE SW+TAVRALR EGG+LHVHG AKDSEE W+DHV+ SI
Sbjct: 946 NTAPKGVADRVCLGLLPSSECSWVTAVRALRKEGGILHVHGNAKDSEEYQWTDHVSKSIY 1005
Query: 504 NIAKSEGLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 391
IA+SEG CWEV+++H+ERVKWY PHIRH+V DVRCKQ
Sbjct: 1006 EIARSEGYCWEVTIEHVERVKWYAPHIRHVVADVRCKQ 1043
>ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
max]
Length = 1068
Score = 372 bits (955), Expect = e-101
Identities = 173/218 (79%), Positives = 197/218 (90%)
Frame = -1
Query: 1044 QGRVASTGTRDSTLDILVGDDGWVDHRENGIMYSFDATKCMFSWGNLSEKLRMACLDCKG 865
QG VA+TGTRDSTL ILVGD+GWV+HRENGI+YSFDATKCMFSWGNLSEK+RMA LDCK
Sbjct: 848 QGPVAATGTRDSTLQILVGDNGWVNHRENGILYSFDATKCMFSWGNLSEKIRMARLDCKD 907
Query: 864 EVLVDLFAGIGYFVLPFLVRAKAKMVYACEWNPHALEALQRNVESNFVGDRCVILEGDNR 685
EV+VDLFAGIGYFVLPFLVRA+AK+VYACEWNPHA+EALQ N+E+N V DRC+ILEGDNR
Sbjct: 908 EVVVDLFAGIGYFVLPFLVRAQAKLVYACEWNPHAVEALQHNLEANSVADRCIILEGDNR 967
Query: 684 ATAPKGVADRVCLGLLPSSEGSWLTAVRALRMEGGMLHVHGIAKDSEESIWSDHVANSIQ 505
TAPK VADRVCLGL+PSSE SW+TAVRALR EGG+LHVHG +DSEES W DHV+ SI
Sbjct: 968 ITAPKSVADRVCLGLIPSSELSWVTAVRALRREGGILHVHGNTRDSEESQWIDHVSKSIY 1027
Query: 504 NIAKSEGLCWEVSVQHLERVKWYGPHIRHLVLDVRCKQ 391
+IA+SEG WEVS++H+ERVKWY PHIRH+V DVRC+Q
Sbjct: 1028 DIARSEGYTWEVSIEHVERVKWYAPHIRHVVADVRCRQ 1065