BLASTX nr result

ID: Coptis23_contig00022320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022320
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521719.1| conserved hypothetical protein [Ricinus comm...   181   8e-44
ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252...   176   4e-42
ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|NP_567498.1| uncharacterized protein [Arabidopsis thaliana] ...   160   2e-37
ref|XP_002868132.1| hypothetical protein ARALYDRAFT_493236 [Arab...   158   7e-37

>ref|XP_002521719.1| conserved hypothetical protein [Ricinus communis]
           gi|223539110|gb|EEF40706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score =  181 bits (460), Expect = 8e-44
 Identities = 86/161 (53%), Positives = 119/161 (73%)
 Frame = -1

Query: 625 AAPLIFLVTNFLQIITIFLQRLKKRRSSSAEQNQLREQIKELVREAESLSNPSTFXXXXX 446
           AAPLIFLV  F Q+++ +L++LKKR + ++ + QLR +IK+L++EA S S PSTF     
Sbjct: 17  AAPLIFLVVVFFQLVSTYLEQLKKRAAKTSTEVQLRTEIKQLLKEASSYSQPSTFAQAAK 76

Query: 445 XXXXXXXKEKVLLKSQEMHSKEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQ 266
                  KEK L   QEMH+KE KLSYD Y K + + K+VT+ +++ WFW  PVAA+S+Q
Sbjct: 77  LRRLAAAKEKELANLQEMHNKEMKLSYDLYLKIIFLSKIVTYFVMICWFWRTPVAAISQQ 136

Query: 265 LLQPFGKVLSWSAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 143
           L+QPFG++LSW AG L ND+++VGIIPWLI+S RVSKF+C+
Sbjct: 137 LVQPFGRMLSWGAGGLFNDNVLVGIIPWLILSTRVSKFVCR 177


>ref|XP_002280184.1| PREDICTED: uncharacterized protein LOC100252414 [Vitis vinifera]
           gi|296088655|emb|CBI37646.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  176 bits (445), Expect = 4e-42
 Identities = 92/172 (53%), Positives = 121/172 (70%)
 Frame = -1

Query: 652 ENLLVKSRGAAPLIFLVTNFLQIITIFLQRLKKRRSSSAEQNQLREQIKELVREAESLSN 473
           E+L  ++  AAPLIF V    Q I+++L+  KKR   SAE ++LR +IK+L++EA + S 
Sbjct: 3   ESLDHRNSLAAPLIFTVVISFQFISVWLELSKKRGLRSAEDDKLRGEIKQLLKEASAFSQ 62

Query: 472 PSTFXXXXXXXXXXXXKEKVLLKSQEMHSKEYKLSYDAYFKALTVLKVVTHLMLVVWFWG 293
           PSTF            KEK LLK+QE  ++E K SYD+Y KAL  LKV  + +LV W+W 
Sbjct: 63  PSTFAQAAKLRRMAAAKEKELLKNQESLNREKKSSYDSYLKALLFLKVFFYFVLVCWYWS 122

Query: 292 DPVAAVSKQLLQPFGKVLSWSAGDLDNDHIMVGIIPWLIVSNRVSKFICQKL 137
            PVAA+SKQL+QPFGKVLSW +G   ND++MVGIIPWLI+S RVSKFIC+K+
Sbjct: 123 SPVAAISKQLVQPFGKVLSWRSGVSSNDNVMVGIIPWLILSTRVSKFICRKV 174


>ref|XP_002307214.1| predicted protein [Populus trichocarpa] gi|222856663|gb|EEE94210.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  161 bits (407), Expect = 1e-37
 Identities = 81/161 (50%), Positives = 110/161 (68%)
 Frame = -1

Query: 625 AAPLIFLVTNFLQIITIFLQRLKKRRSSSAEQNQLREQIKELVREAESLSNPSTFXXXXX 446
           AAPLIF +    Q ++I L +LKK+ S SA + QLR +IK+L+++A +LS PSTF     
Sbjct: 17  AAPLIFFIVVAFQFVSIHLHQLKKKGSKSAAEIQLRAEIKQLLKDASALSQPSTFAQAAK 76

Query: 445 XXXXXXXKEKVLLKSQEMHSKEYKLSYDAYFKALTVLKVVTHLMLVVWFWGDPVAAVSKQ 266
                  KEK L   +E H KE K S D+Y K L + KV+T+ +L+ WFW  PVA +S+Q
Sbjct: 77  LRRLAAAKEKELANYKEAHDKEMKRSSDSYPKILFISKVLTYFVLICWFWRTPVAEISQQ 136

Query: 265 LLQPFGKVLSWSAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 143
           L+QPFG+ LSW AG   N+++MVGIIPWLI+S RVSKF+C+
Sbjct: 137 LVQPFGRFLSWRAGGRLNNNVMVGIIPWLILSTRVSKFVCR 177


>ref|NP_567498.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98960933|gb|ABF58950.1| At4g16444 [Arabidopsis
           thaliana] gi|110743059|dbj|BAE99422.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658350|gb|AEE83750.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 178

 Score =  160 bits (405), Expect = 2e-37
 Identities = 82/169 (48%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
 Frame = -1

Query: 643 LVKSRG--AAPLIFLVTNFLQIITIFLQRLKKRRSSSAEQNQLREQIKELVREAESLSNP 470
           L++ RG  AAPL F+V    Q+++ +L +LKK+ S +  +++LR +IK+L+REA +LS P
Sbjct: 6   LIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREASALSQP 65

Query: 469 STFXXXXXXXXXXXXKEKVLLKSQEMHSKEYKLSYDAYFKALTVLKVVTHLMLVVWFWGD 290
           +TF            KEK L +  E H KE KLSYD Y K L   KVV +L+LV+ FW  
Sbjct: 66  ATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVLCFWRT 125

Query: 289 PVAAVSKQLLQPFGKVLSWSAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 143
           P+A ++KQL+QPFG +LSW  G     H+MVGIIPWLI+SNRVSK++C+
Sbjct: 126 PIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCR 174


>ref|XP_002868132.1| hypothetical protein ARALYDRAFT_493236 [Arabidopsis lyrata subsp.
           lyrata] gi|297313968|gb|EFH44391.1| hypothetical protein
           ARALYDRAFT_493236 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  158 bits (400), Expect = 7e-37
 Identities = 81/169 (47%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
 Frame = -1

Query: 643 LVKSRG--AAPLIFLVTNFLQIITIFLQRLKKRRSSSAEQNQLREQIKELVREAESLSNP 470
           L++ RG  AAPL F V    Q+++ +L +LKK+ S +  +++LR +IK+L+REA +LS P
Sbjct: 6   LIEDRGFLAAPLTFFVVVVFQLLSKWLDQLKKKGSKNTRESELRSEIKQLLREASALSQP 65

Query: 469 STFXXXXXXXXXXXXKEKVLLKSQEMHSKEYKLSYDAYFKALTVLKVVTHLMLVVWFWGD 290
           +TF            KEK L +  E H+KE KLSYD Y K L   KVV +L+LV+ FW  
Sbjct: 66  ATFAQAAKLRRSAATKEKELAQYLEQHNKEIKLSYDMYGKVLLASKVVIYLILVLCFWRT 125

Query: 289 PVAAVSKQLLQPFGKVLSWSAGDLDNDHIMVGIIPWLIVSNRVSKFICQ 143
           P+A ++KQL+QPFG +LSW  G     H+MVGIIPWLI+S RVSK++C+
Sbjct: 126 PIAIIAKQLVQPFGTLLSWGTGGHLTGHVMVGIIPWLILSTRVSKYVCR 174


Top