BLASTX nr result

ID: Coptis23_contig00022313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022313
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL70161.1| actin [Agastache rugosa]                               198   4e-49
gb|ACB12049.1| actin [Rehmannia glutinosa]                            197   1e-48
gb|AAB40075.1| actin, partial [Glycine max]                           196   1e-48
gb|AFK35945.1| unknown [Medicago truncatula]                          196   1e-48
gb|AFB83349.1| actin 2 [Medicago sativa] gi|378407818|gb|AFB8335...   196   1e-48

>gb|AFL70161.1| actin [Agastache rugosa]
          Length = 377

 Score =  198 bits (503), Expect = 4e-49
 Identities = 97/147 (65%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  PKENREDMTEVMFEIFNVPSLCIAIQAVLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLL 202
           PK NRE MT++MFE FNVP++ +AIQAVL++Y  GRTTG+V++ GDGVS  VPIYEGY L
Sbjct: 114 PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYAL 173

Query: 203 SDAMNRFNLAGQDLTDFLMKMLTESGKMFSTDAGQEIVCNIKEKLAYVAIDYEQEK--AK 376
             A++R +LAG+DLTD+LMK+LTE G MF+T A +EIV ++KEKLAYVA+D+EQE   +K
Sbjct: 174 PHAISRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDVKEKLAYVALDFEQESETSK 233

Query: 377 DNSSIEASYELPDGQVIAIGAERFTCP 457
           ++SS+E SYELPDGQVI IGAERF CP
Sbjct: 234 NSSSVEKSYELPDGQVITIGAERFRCP 260


>gb|ACB12049.1| actin [Rehmannia glutinosa]
          Length = 241

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/147 (65%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  PKENREDMTEVMFEIFNVPSLCIAIQAVLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLL 202
           PK NRE MT++MFE FNVP++ +AIQAVL++Y  GRTTG+V++ GDGVS  VPIYEGY L
Sbjct: 35  PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYAL 94

Query: 203 SDAMNRFNLAGQDLTDFLMKMLTESGKMFSTDAGQEIVCNIKEKLAYVAIDYEQEK--AK 376
             A+ R +LAG+DLTD+LMK+LTE G MF+T A +EIV ++KEKLAYVA+D+EQE   AK
Sbjct: 95  PHAILRLDLAGRDLTDYLMKILTERGYMFTTSAEREIVRDVKEKLAYVALDFEQESETAK 154

Query: 377 DNSSIEASYELPDGQVIAIGAERFTCP 457
           ++S++E SYELPDGQVI IGAERF CP
Sbjct: 155 NSSAVEKSYELPDGQVITIGAERFRCP 181


>gb|AAB40075.1| actin, partial [Glycine max]
          Length = 336

 Score =  196 bits (499), Expect = 1e-48
 Identities = 99/147 (67%), Positives = 120/147 (81%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  PKENREDMTEVMFEIFNVPSLCIAIQAVLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLL 202
           PK NRE MT++MFE FNVP++ +AIQAVL++Y  GRTTG+V++ GDGVS  VPIYEGY L
Sbjct: 94  PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 153

Query: 203 SDAMNRFNLAGQDLTDFLMKMLTESGKMFSTDAGQEIVCNIKEKLAYVAIDYEQ--EKAK 376
             A+ R +LAG+DLTD LMK+LTE G MF+T A +EIV ++KEKLAYVA+DYEQ  E AK
Sbjct: 154 PHAILRLDLAGRDLTDHLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAK 213

Query: 377 DNSSIEASYELPDGQVIAIGAERFTCP 457
            +SS+E SYELPDGQVI IGAERF CP
Sbjct: 214 SSSSVEKSYELPDGQVITIGAERFRCP 240


>gb|AFK35945.1| unknown [Medicago truncatula]
          Length = 377

 Score =  196 bits (499), Expect = 1e-48
 Identities = 100/147 (68%), Positives = 120/147 (81%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  PKENREDMTEVMFEIFNVPSLCIAIQAVLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLL 202
           PK NRE MT++MFE FNVP++ +AIQAVL++Y  GRTTG+V++ GDGVS  VPIYEGY L
Sbjct: 114 PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173

Query: 203 SDAMNRFNLAGQDLTDFLMKMLTESGKMFSTDAGQEIVCNIKEKLAYVAIDYEQ--EKAK 376
             A+ R +LAG+DLTD LMK+LTE G MF+T A +EIV +IKEKLAYVA+DYEQ  E AK
Sbjct: 174 PHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAK 233

Query: 377 DNSSIEASYELPDGQVIAIGAERFTCP 457
            +SSIE +YELPDGQVI IGAERF CP
Sbjct: 234 SSSSIEKNYELPDGQVITIGAERFRCP 260


>gb|AFB83349.1| actin 2 [Medicago sativa] gi|378407818|gb|AFB83350.1| actin 2
           [Medicago truncatula]
          Length = 377

 Score =  196 bits (499), Expect = 1e-48
 Identities = 100/147 (68%), Positives = 120/147 (81%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  PKENREDMTEVMFEIFNVPSLCIAIQAVLTMYNYGRTTGVVVELGDGVSEVVPIYEGYLL 202
           PK NRE MT++MFE FNVP++ +AIQAVL++Y  GRTTG+V++ GDGVS  VPIYEGY L
Sbjct: 114 PKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 173

Query: 203 SDAMNRFNLAGQDLTDFLMKMLTESGKMFSTDAGQEIVCNIKEKLAYVAIDYEQ--EKAK 376
             A+ R +LAG+DLTD LMK+LTE G MF+T A +EIV +IKEKLAYVA+DYEQ  E AK
Sbjct: 174 PHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAK 233

Query: 377 DNSSIEASYELPDGQVIAIGAERFTCP 457
            +SSIE +YELPDGQVI IGAERF CP
Sbjct: 234 SSSSIEKNYELPDGQVITIGAERFRCP 260


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