BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022307
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Viti...   230   2e-58
emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]              226   3e-57
ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] g...   226   3e-57
emb|CBX25323.1| hypothetical_protein [Oryza brachyantha]              223   3e-56
ref|XP_002457392.1| hypothetical protein SORBIDRAFT_03g006610 [S...   221   1e-55

>ref|XP_002284266.1| PREDICTED: 60S ribosomal protein L26-1 [Vitis vinifera]
           gi|147769559|emb|CAN72392.1| hypothetical protein
           VITISV_032611 [Vitis vinifera]
           gi|147786955|emb|CAN73296.1| hypothetical protein
           VITISV_001956 [Vitis vinifera]
          Length = 151

 Score =  230 bits (586), Expect = 2e-58
 Identities = 118/151 (78%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
 Frame = -3

Query: 648 MKHNPRVTSSRRKCRKAHFTAPSSIRRVIMSAPLSTDLRSKYNVRSIPIRKDDEVQVVRG 469
           MK+NPRVTSSRRKCRKAHFTAPSS+RRV+MSAPLSTDLR+KYNVRS+PIRKDDEVQVVRG
Sbjct: 1   MKYNPRVTSSRRKCRKAHFTAPSSVRRVLMSAPLSTDLRNKYNVRSVPIRKDDEVQVVRG 60

Query: 468 TYKGREGKIVQVYRRKWVIHIERITREKANGSTVNVGISPSXXXXXXXXXXXXXKFLLER 289
           T+KGREGK+VQVYRRKWVIHIERITREK NGSTVNVGI+PS             K LL+R
Sbjct: 61  TFKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVINKLKLDKDRKSLLDR 120

Query: 288 KAKGRGDDKEKGKFTAEDVVSGGA-SLKEID 199
           KAKGR  DK KGKFTAEDV +  A SL+EID
Sbjct: 121 KAKGRAADKAKGKFTAEDVAAAAAPSLQEID 151


>emb|CBX25406.1| hypothetical_protein [Oryza brachyantha]
          Length = 150

 Score =  226 bits (577), Expect = 3e-57
 Identities = 113/150 (75%), Positives = 126/150 (84%)
 Frame = -3

Query: 648 MKHNPRVTSSRRKCRKAHFTAPSSIRRVIMSAPLSTDLRSKYNVRSIPIRKDDEVQVVRG 469
           MK NPRVTSSRRKCRKAHFTAPSS+RRV+MSA LS +LRSKYNVRSIP+RKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSAELRSKYNVRSIPVRKDDEVQVVRG 60

Query: 468 TYKGREGKIVQVYRRKWVIHIERITREKANGSTVNVGISPSXXXXXXXXXXXXXKFLLER 289
           +YKGREGK+VQVYRR+WVIH+ERITREK NGSTVNVGI PS             K +L+R
Sbjct: 61  SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 288 KAKGRGDDKEKGKFTAEDVVSGGASLKEID 199
           KA+GR  DK KGKFTAEDV + GASL+EID
Sbjct: 121 KARGRAADKAKGKFTAEDVAAAGASLQEID 150


>ref|NP_001066165.1| Os12g0150100 [Oryza sativa Japonica Group] gi|315113264|pdb|3IZR|Y
           Chain Y, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|77553015|gb|ABA95811.1| 60S
           ribosomal protein L26-1, putative, expressed [Oryza
           sativa Japonica Group] gi|113648672|dbj|BAF29184.1|
           Os12g0150100 [Oryza sativa Japonica Group]
           gi|125535782|gb|EAY82270.1| hypothetical protein
           OsI_37478 [Oryza sativa Indica Group]
           gi|125578511|gb|EAZ19657.1| hypothetical protein
           OsJ_35234 [Oryza sativa Japonica Group]
           gi|215740433|dbj|BAG97089.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|346703806|emb|CBX24474.1| hypothetical_protein [Oryza
           glaberrima]
          Length = 150

 Score =  226 bits (576), Expect = 3e-57
 Identities = 114/150 (76%), Positives = 125/150 (83%)
 Frame = -3

Query: 648 MKHNPRVTSSRRKCRKAHFTAPSSIRRVIMSAPLSTDLRSKYNVRSIPIRKDDEVQVVRG 469
           MK NPRVTSSRRKCRKAHFTAPSS+RRV+MSA LST+LR KYNVRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 468 TYKGREGKIVQVYRRKWVIHIERITREKANGSTVNVGISPSXXXXXXXXXXXXXKFLLER 289
           +YKGREGK+VQVYRR+WVIH+ERITREK NGSTVNVGI PS             K +L+R
Sbjct: 61  SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 288 KAKGRGDDKEKGKFTAEDVVSGGASLKEID 199
           KA GR  DK KGKFTAEDV + GASL+EID
Sbjct: 121 KASGRAADKAKGKFTAEDVAAAGASLQEID 150


>emb|CBX25323.1| hypothetical_protein [Oryza brachyantha]
          Length = 153

 Score =  223 bits (568), Expect = 3e-56
 Identities = 115/153 (75%), Positives = 127/153 (83%), Gaps = 3/153 (1%)
 Frame = -3

Query: 648 MKHNPRVTSSRRKCRKAHFTAPSSIRRVIMSAPLSTDLRSKYNVRSIPIRKDDEVQVVRG 469
           MK +PRVTSSRRKCRKAHFTAPSS+RRV+MSA LST+LRSKYNVRSIP+RKDDEVQVVRG
Sbjct: 1   MKRDPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRSKYNVRSIPVRKDDEVQVVRG 60

Query: 468 TYKGREGKIVQVYRRKWVIHIERITREKANGSTVNVGISPSXXXXXXXXXXXXXKFLLER 289
           TYKGREGK+VQVYRR+WVIHIERITREK NGSTVNVGI PS             K +L+R
Sbjct: 61  TYKGREGKVVQVYRRRWVIHIERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDR 120

Query: 288 KAKGRGDDKEKGKFTAEDVV---SGGASLKEID 199
           KA+GR  DK KGKFTAEDV    + GASL+EID
Sbjct: 121 KARGRAADKAKGKFTAEDVAAAGAAGASLQEID 153


>ref|XP_002457392.1| hypothetical protein SORBIDRAFT_03g006610 [Sorghum bicolor]
           gi|241929367|gb|EES02512.1| hypothetical protein
           SORBIDRAFT_03g006610 [Sorghum bicolor]
          Length = 157

 Score =  221 bits (563), Expect = 1e-55
 Identities = 115/157 (73%), Positives = 126/157 (80%), Gaps = 7/157 (4%)
 Frame = -3

Query: 648 MKHNPRVTSSRRKCRKAHFTAPSSIRRVIMSAPLSTDLRSKYNVRSIPIRKDDEVQVVRG 469
           MK NPRVTSSRRKCRKAHFTAPSS+RRV+MSA LST+LR KYNVRSIPIRKDDEVQVVRG
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60

Query: 468 TYKGREGKIVQVYRRKWVIHIERITREKANGSTVNVGISPSXXXXXXXXXXXXXKFLLER 289
           TYKGREGK+VQVYRR+WVIH+ERITREK NGSTVNVGI PS             K LL+R
Sbjct: 61  TYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVIVTKLKLDKDRKALLDR 120

Query: 288 KAKGRGDDKEKGKFTAEDVVSG-------GASLKEID 199
           KA+GR  DK KGKFTA+DV +        GASL+EID
Sbjct: 121 KARGRNADKAKGKFTADDVAAAAGGAAATGASLQEID 157