BLASTX nr result

ID: Coptis23_contig00022293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022293
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|2...   192   7e-47
ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|2...   191   3e-46
ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|2...   190   4e-46
ref|XP_004148451.1| PREDICTED: probable WRKY transcription facto...   189   6e-46
ref|XP_002533354.1| WRKY transcription factor, putative [Ricinus...   189   7e-46

>ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|222853513|gb|EEE91060.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  192 bits (489), Expect = 7e-47
 Identities = 103/188 (54%), Positives = 134/188 (71%), Gaps = 5/188 (2%)
 Frame = +3

Query: 111 YIPQDFNNSNHTYTYLMDHLD--FIDFEVSDFLIPEAGSEEDSTSTHIDYGQSNPVLSEK 284
           Y PQ+   S + Y+Y+ + LD   I+F+ SD+L+ + G  ED +S+       N V SE+
Sbjct: 3   YYPQNPKPS-YNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSSQ------NMVSSEQ 55

Query: 285 --SDETMAYDGDDNKRTTSNINVKSEMKKTKTDAGVRIAFRTKSELEIMDDGYKWRKYGK 458
             S  +  Y G     T+ N ++++ +KK KT+   R+AFRTKSELEIMDDG+KWRKYGK
Sbjct: 56  VASGSSTGYSG----ATSRNNSMQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKWRKYGK 111

Query: 459 KSVKNSPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPL 635
           KSVKNSPNPRNYY+CS  GC+VKKRVER++ED  YV+T+YDGVHNHESP +VYY N+MPL
Sbjct: 112 KSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSRYVLTSYDGVHNHESPCMVYYNNQMPL 171

Query: 636 MVPNGWTL 659
           M  N WTL
Sbjct: 172 MASNAWTL 179


>ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|222853512|gb|EEE91059.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  191 bits (484), Expect = 3e-46
 Identities = 102/188 (54%), Positives = 133/188 (70%), Gaps = 5/188 (2%)
 Frame = +3

Query: 111 YIPQDFNNSNHTYTYLMDHLD--FIDFEVSDFLIPEAGSEEDSTSTHIDYGQSNPVLSEK 284
           Y PQ+   S + Y+Y+ + LD   I+F+ SD+L+ + G  ED +S+       N V  E+
Sbjct: 3   YYPQNPKPS-YNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSSQ------NMVSPEQ 55

Query: 285 --SDETMAYDGDDNKRTTSNINVKSEMKKTKTDAGVRIAFRTKSELEIMDDGYKWRKYGK 458
             S  +  Y G     T+ N ++++ +KK KT+   R+AFRTKSELEIMDDG+KWRKYGK
Sbjct: 56  VASGSSTGYSG----ATSRNNSMQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKWRKYGK 111

Query: 459 KSVKNSPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPL 635
           KSVKNSPNPRNYY+CS  GC+VKKRVER++ED  YV+T+YDGVHNHESP +VYY N+MPL
Sbjct: 112 KSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSRYVLTSYDGVHNHESPCMVYYNNQMPL 171

Query: 636 MVPNGWTL 659
           M  N WTL
Sbjct: 172 MASNAWTL 179


>ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|222856583|gb|EEE94130.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  190 bits (482), Expect = 4e-46
 Identities = 98/178 (55%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
 Frame = +3

Query: 132 NSNHTYTYLMDHLD--FIDFEVSDFLIPEAGSEEDSTSTHIDYGQSNPVLSEKSDETMAY 305
           N NH ++Y  +  D    +F+VSD+L+ + G  ED++S+      S  V S  S     Y
Sbjct: 7   NPNHDFSYFNEGFDPPATEFQVSDYLMLDDGFGEDNSSSQ-SMASSEQVPSGSSS---GY 62

Query: 306 DGDDNKRTTSNINVKSEMKKTKTDAGVRIAFRTKSELEIMDDGYKWRKYGKKSVKNSPNP 485
            G     T+ N ++++ +KK K + G R+AFRTKSELE+MDDG+KWRKYGKKSVKNSP+P
Sbjct: 63  SG----ATSRNNSMQNGVKKNKIEGGHRVAFRTKSELEVMDDGFKWRKYGKKSVKNSPHP 118

Query: 486 RNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPLMVPNGWT 656
           RNYY+CS  GC VKKRVER+ ED +YVITTYDGVHNHESP +VYY N++PL VPN WT
Sbjct: 119 RNYYKCSSGGCDVKKRVERDGEDSAYVITTYDGVHNHESPCMVYYNNQIPLAVPNAWT 176


>ref|XP_004148451.1| PREDICTED: probable WRKY transcription factor 51-like [Cucumis
           sativus]
          Length = 205

 Score =  189 bits (481), Expect = 6e-46
 Identities = 97/200 (48%), Positives = 132/200 (66%), Gaps = 17/200 (8%)
 Frame = +3

Query: 84  MADYTSQPTYIPQDFNNSNHT-YTYLMDHLDFIDFEVSDFLI----------------PE 212
           MA +  + + +  + N +N+T +  ++D   F DFE+SDFL+                P 
Sbjct: 1   MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60

Query: 213 AGSEEDSTSTHIDYGQSNPVLSEKSDETMAYDGDDNKRTTSNINVKSEMKKTKTDAGVRI 392
             S E  TS  +D G S+ V+   S   ++  G     +T++I  K+  KK K + G R+
Sbjct: 61  MTSSEKITSGGVDSGGSSTVIDTGSSVVVSSSG----ASTTSIRSKNGEKKRKGEMGCRV 116

Query: 393 AFRTKSELEIMDDGYKWRKYGKKSVKNSPNPRNYYRCSHQGCHVKKRVEREKEDPSYVIT 572
           AFRTKSE EIMDDGYKWRKYGKKSVKNSPNPRNYY+CS +GC+VKK+VER++ED +YVIT
Sbjct: 117 AFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVIT 176

Query: 573 TYDGVHNHESPSIVYYNEMP 632
           TY+G+HNHESP +VYYN++P
Sbjct: 177 TYEGIHNHESPFVVYYNQLP 196


>ref|XP_002533354.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223526806|gb|EEF29027.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 215

 Score =  189 bits (480), Expect = 7e-46
 Identities = 104/207 (50%), Positives = 136/207 (65%), Gaps = 17/207 (8%)
 Frame = +3

Query: 90  DYTSQPTYIPQDFNNSNHTYTYLMD-HLDFIDFEVSDFLIPEAGSEEDSTSTHIDYGQSN 266
           DY + P   P ++N S+  +  +MD  L  ++F++SDFL+ + G  +DS+S      QS 
Sbjct: 10  DYPANPN--PNNYNYSH--FDPIMDPSLQPVEFQLSDFLMLDGGFGDDSSS------QST 59

Query: 267 PVLSEK---SDETMAYDGDDNKRTTSNINV---KSEMKKTKTDAGVRIAFRTKSELEIMD 428
            VLS++      T    G     T+ N N    K  +KK K + G R+AFRTKSELEIMD
Sbjct: 60  MVLSDQFASGASTEYSSGTAASATSENANNDKWKKGVKKEKAEVGHRVAFRTKSELEIMD 119

Query: 429 DGYKWRKYGKKSVKNSPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPS 608
           DG+KWRKYGKKSVKNSP+PRNYY+CS  GC VKKRVER++EDP YVITTYDG+HNH++P 
Sbjct: 120 DGFKWRKYGKKSVKNSPHPRNYYKCSSGGCSVKKRVERDREDPKYVITTYDGMHNHQTPC 179

Query: 609 IVYYN----------EMPLMVPNGWTL 659
           +VYYN          ++P+M PNGW L
Sbjct: 180 VVYYNHHHRHHYHQDQVPVMNPNGWNL 206


Top